Corynebacterium sp. Z-1: RIU96_11015
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Entry
RIU96_11015 CDS
T11129
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
core Corynebacterium sp. Z-1
Pathway
core03030
DNA replication
core03430
Mismatch repair
core03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
core00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RIU96_11015 (holA)
03430 Mismatch repair
RIU96_11015 (holA)
03440 Homologous recombination
RIU96_11015 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
core03032
]
RIU96_11015 (holA)
03400 DNA repair and recombination proteins [BR:
core03400
]
RIU96_11015 (holA)
Enzymes [BR:
core01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RIU96_11015 (holA)
DNA replication proteins [BR:
core03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RIU96_11015 (holA)
DNA repair and recombination proteins [BR:
core03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RIU96_11015 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
WNI12721
LinkDB
All DBs
Position
complement(2261999..2262943)
Genome browser
AA seq
314 aa
AA seq
DB search
MGRMLNPVHLVLGEDEFLAERATKAIIDAASTGAGAEVSRLRAGDVTEGELLMATSPSLF
AEERVVVFTGVEQAGKEPTELLLQAARDPAPGMTLIIEHTGGGRNKSYVAKFKKVAEVHT
VDPLRDRDRHAWLNNEFRRLGAHPTPDVVAALLESVGSDLRELATAASQLVADTEGELTV
RSVHAYYSGVAEISGFDIADLAVAGRAERALASTRRALQLGISPVALAAALARKVGDIAK
LYSTRGNPDQIARELGMHPFAAKKTMQAARTWSGEAVSEAVIVIAELDAEVKGQGGDPDY
AIEYAVRKIAELAR
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcatgctcaatcccgtccacctcgtcttgggcgaagacgaattcctcgccgag
cgcgcgacgaaggccatcatcgacgccgcctccaccggtgcgggcgccgaggtcagccgc
ctgcgcgctggcgacgtcaccgagggggagcttctgatggccacgagcccctcgctgttc
gccgaggagcgcgtggtggtgttcaccggcgtggagcaggcgggcaaagagcccacggag
ctgttgttgcaggcggcacgtgaccccgcgccggggatgactctgatcatcgagcacacc
ggaggcggacgcaacaagtcgtacgtggccaagttcaaaaaggtcgctgaggtgcacacg
gtcgacccgctgcgcgacagggaccgccacgcctggctgaacaacgagttccgccgcctc
ggggcccaccccactcccgatgttgttgccgcgctgctagaatccgtcggctccgatctg
cgcgagctggccaccgcggcaagccaactcgtggcagacaccgagggggagctgacggtg
aggtccgttcatgcctactactccggggtagctgagatttccgggttcgacatcgcagac
cttgccgtggcgggacgcgcagagcgggcactggcctcaacgcggcgcgcgctgcagctg
ggcatcagccccgtcgccctcgccgcggcgctggccaggaaggtcggcgacatcgccaag
ctctacagcacccgcggcaaccccgaccagatcgcccgggagctggggatgcacccgttc
gcggcgaagaagaccatgcaggccgcgcggacctggtccggtgaggcggtctcggaggcc
gtgatcgtcatcgctgagctcgacgccgaggtcaaaggccagggcggcgatccggactac
gcgatcgaatacgcggtgcgaaaaatcgcggagctcgcccgctaa
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