Corynebacterium sp. NML98-0116: BJP05_02375
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Entry
BJP05_02375 CDS
T10271
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K05346
deoxyribonucleoside regulator
Organism
corn Corynebacterium sp. NML98-0116
Brite
KEGG Orthology (KO) [BR:
corn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
corn03000
]
BJP05_02375
Transcription factors [BR:
corn03000
]
Prokaryotic type
Other transcription factors
Others
BJP05_02375
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sugar-bind
MarR_2
HTH_23
Sigma70_r4_2
Sigma70_r4
HTH_Crp_2
HTH_36
HVO_A0261_N
HTH_IclR
HTH_ParB
GntR
HTH_24
TrmB
MarR
HTH_28
HTH_3
DUF134
HTH_31
Fe_dep_repress
Cro
TnsD
Motif
Other DBs
NCBI-ProteinID:
AOX05143
LinkDB
All DBs
Position
complement(558678..559622)
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AA seq
314 aa
AA seq
DB search
MDTRDRDALTAAKLYYRSELSQAEVAAEMGCSRPTVAKLLQHAKDRGYVTIEVHDPQEAD
EILIEDLTSRYALEGVRIVHPANPSAAIMEDLGVAGARYLESMPLDGLSVGVSWGKTLLN
IARNLRSTNMRARQIVQLKGGSSRSNLATNDFETITGFCTAFNAPALTLPLPVIFERVET
KEIVEQDSHIADVLQQGRETDVAVFTVGSVRKQSLLMNLGYLSEEMSRELLGVAVGDACS
RFYTREGDVASKRIDDLTVGIELDELRARPRRVLVAGGLYKAEAIETALWMGLASDLVID
QPTAVRVLEIAKTR
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggacacacgtgatcgggatgcgctgacggctgccaagttgtattaccgctcggagctg
agtcaggcggaggttgctgcggagatgggctgctcccgtcctacggtggcgaagcttctg
cagcacgcgaaggaccgtggctacgtcactattgaggtacacgacccgcaggaggcggac
gagatcctgatcgaggatctcacctcccggtacgcgctggagggtgtgcggattgttcac
ccggcgaacccatctgcagcgatcatggaggatcttggggtagcgggcgcgcgctacctg
gagtcgatgccgttggatggcctttcggtgggtgtgtcctggggaaaaacgctgctcaac
attgcgcggaatctacgatcgacgaacatgcgggcgcgccagattgtgcagttgaaaggt
gggtcgtcgcgttccaacctggcaacgaatgactttgagacgatcaccggtttctgcacc
gcgttcaacgcgcccgcgttaacgctcccattgcctgtcatttttgagcgagtggaaact
aaggagatcgtggagcaggattcccacatcgccgacgtactgcagcaggggcgggagacc
gacgtggcggtgttcacggtgggttctgtgcgaaagcagagcttgctgatgaacctgggg
tacctgtctgaggagatgtcgcgggagctgctcggggttgcggtgggggatgcttgttcg
cggttctacacgcgggagggggatgtggcgtcgaaaagaattgatgatctgacggtgggc
attgagcttgacgagctgcgggcgagaccacgtcgagtgctggtagctgggggtttgtat
aaagctgaggcgattgagacggcgctgtggatggggctggccagtgatttggtgattgat
cagccgacggcggttcgggtgctggagatcgcgaagacccgctaa
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