Corynebacterium sp. NML98-0116: BJP05_03500
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Entry
BJP05_03500 CDS
T10271
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
corn Corynebacterium sp. NML98-0116
Pathway
corn00900
Terpenoid backbone biosynthesis
corn01100
Metabolic pathways
corn01110
Biosynthesis of secondary metabolites
Module
corn_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
corn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
BJP05_03500
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
BJP05_03500
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
corn01006
]
BJP05_03500
Enzymes [BR:
corn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
BJP05_03500
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
BJP05_03500
2.5.1.29 geranylgeranyl diphosphate synthase
BJP05_03500
Prenyltransferases [BR:
corn01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
BJP05_03500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
YcbB
Motif
Other DBs
NCBI-ProteinID:
AOX05336
LinkDB
All DBs
Position
complement(804737..805849)
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AA seq
370 aa
AA seq
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MEHNVSEVSSQGPTLEAIPALVEEQLRVFFDGQESVVAEIGAPVEDAVSYLRKFVLGGGK
RIRPLYGWAGFIGAGGLDHSQENPDAVLRAVSSLEFIQACALIHDDIIDASDTRRGNPTV
HRAVEATHRNEGYRGDAASFGEHSAILIGDLALVWAEDMWRYSGLTNDALDRAAKPWVGM
RTEVIGGQLLDIMLEAKGSESVELADKVNRYKTAAYTIERPLHLGAAIAGAPDATIAAFR
GYGRDIGIAYQLRDDILGVFGEPEVTGKPAGDDIREGKRTVLFATALANLDASDPAAAQR
LRDGIGVAASPEELSELAELIQESGAVEAVEARIDRLTESGLQHLSDAGIDDAVAQFMRD
LAIKATARRM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggagcacaacgtgtctgaagtatcctcacaagggccgacgctcgaggctatccccgca
cttgttgaggagcagcttcgcgtgttcttcgacggccaggaatcggtagtcgcggaaatt
ggtgccccagtggaggacgcagtctcttacctgcgcaagtttgtcctcggtggaggcaag
cggatacggccactctacggttgggctggcttcatcggcgcaggagggcttgaccacagc
caggagaaccccgacgcggtgctgcgcgcagtgagctcgctcgagttcattcaggcatgt
gcgctcatccacgacgacattatcgacgcctccgacacccggcgcggcaacccaacagtg
caccgcgcggttgaggctacgcaccgcaacgaaggctaccgtggtgacgccgcttcgttc
ggcgagcactcggccattttgattggcgatcttgcgctggtgtgggcagaagacatgtgg
cgatactcggggctcacgaatgatgccctcgaccgcgcggcgaagccgtgggtggggatg
cgcactgaggtgatcggcggccagctgctggacatcatgttagaggctaagggcagcgaa
tctgttgagctcgcagacaaggtgaatcggtacaagaccgctgcgtacacgattgaacgg
ccgctccaccttggcgccgcgattgccggcgcgccggatgcaacgatcgccgcgttccgt
ggttacggacgtgatattggcattgcgtaccagctccgcgatgacatccttggggtcttc
ggtgaacctgaggtgaccggcaagccggctggcgacgatatccgtgagggcaagcgtacc
gtcttgttcgccactgcgctggcaaacttggacgcgtccgatcctgccgcagcgcaacgc
cttcgcgacgggattggtgtcgcagcatcgccagaggagctttccgaactcgcagagctt
attcaagaaagtggcgccgtcgaggcagtagaggcgcgcatcgaccgcctcactgaatca
ggcctgcagcacctttcggacgcagggattgatgatgcagttgcgcagttcatgcgtgac
ttagctatcaaagccacggctaggcgtatgtag
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