Corynebacterium sp. NML98-0116: BJP05_03875
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Entry
BJP05_03875 CDS
T10271
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
corn Corynebacterium sp. NML98-0116
Brite
KEGG Orthology (KO) [BR:
corn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
corn03036
]
BJP05_03875
Chromosome and associated proteins [BR:
corn03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
BJP05_03875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
SMC_hinge
Uds1
CCDC39
TruB_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AOX05399
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All DBs
Position
887392..890856
Genome browser
AA seq
1154 aa
AA seq
DB search
MHLKSLTLKGFKSFASSTTMKFEPGICAVVGPNGSGKSNVVDALAWVMGEQGAKNLRGGK
MQDVIFAGAGDRKPLGRAEVTLTFDNSDKHLPVDFTEVAITRRMFRDGASEYEINGSKAR
LMDIQELLSDSGIGREMHIIVGQGKLSEILESRPEERRAFIEEAAGVLKHRRRKEKAQRK
LQSMQGNVDRLQDLTDELGKQLKPLERQAEAAKRAATVQATLRDARLRLAGHQMVTLQAA
HAQSDESAKLLEEQVETVTASLESAEEQYAQLEEEQREVQPRAQESQETWFALSSLEERA
NATLRIAQERAHNLNTQTEYHGQDPEELLARAAAADEEYEVAIEAAEEAAERLEVVREDV
AEYQAAFDEAEREHVAQIQAVADRREGVVRLVAQEEAHQQAVLGGEQEATRLEEQLSLSS
ERAHSARGEAEEVAEKIAELEARRGPLVHEYEQASSELTAAEQRFQELQMQQREHERAVF
TLQSKIETLQHQMPTRTAEEMLGGYPALASLVKAPADLAGALAAALGGFSEALVGERDLD
VVEQLQSADRASIVEAVGGALWRVETDGCYDWLLDHLDVDVSVAGPVARLLADVVVVETP
QEGVDVVKADPRLRAVTREGALFGEGWMSVGIASASTVEVSAQVEAAQRDLRTAEHALAE
LSGTFEGAQLAAEDARVNVAAAKAALREHDTEVASWQREHQRLAAQSDTAEQERVRAAQQ
LEEAEQRLAQRREQLLETQERLSRIDDTPAAEGPSPEARDAASQQLTQAKAIELEAVLAA
RETQQRAQTIAGKGDALRRQAENERQAKARHDAAVARRRSQALLAGAVKEHTEALISRVQ
DALQRATAQRDELQRTLAALQGRIQQERSQVSAARQQLNRLSDRAHAADIARSQAKVRLE
EAQQKIVESLGISVDDLLANFAPGEDFDESTETQRLRQAEKDLRSLGKVNPLALEEFKAL
EERYTFLSTQLADVIQARKDLLDVIEDVDAHILQLFTDAWHDVEEEFPRVFHTLFPGGEA
RLILTEPDDMLLTGIEIEARPPGKRVKRLSLLSGGEKSLTALAFLVAIFRARPSPFYVLD
EVEAALDDVNLRRLIALLEELRQDSQLIVITHQKPTMNVANVLYGVTMRGDGVTRVLSQR
MRPAGSAPDSDPDA
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgaaatcgttgacgctgaagggctttaagtccttcgcttcttcgacgacgatg
aagttcgagcccggcatctgcgctgttgtcggaccgaacggctcaggtaaatcgaacgtc
gtcgacgcgcttgcctgggtgatgggggagcagggtgcgaagaatctacgcggtgggaag
atgcaggatgtcatcttcgcgggagcgggggaccgcaagccactagggcgcgcagaggta
acactcaccttcgacaacagcgataagcaccttccagtggacttcacggaggttgcgatc
acgcgacgtatgttccgtgatggagcctccgagtacgaaattaacggctcgaaagcccgg
ctgatggacattcaggagctgttgtcggactcaggtattggccgcgagatgcacatcatc
gtcgggcagggcaagctgtctgagattttggagtcgcgccctgaggagcgccgagcgttc
attgaggaagccgcgggtgtgctgaagcatcggcgtcggaaggaaaaggcgcaacgcaag
cttcaatcgatgcaaggcaacgtcgacaggctgcaggatctgacagatgagcttggcaag
cagctcaagccgctggagcgccaggccgaagccgcgaagcgcgccgcgactgtgcaagcc
acgcttcgcgacgcccggctccgcctcgccggccaccagatggtcacgctgcaggcagcg
catgcacaaagtgacgagagtgcgaagctgctcgaagaacaggtcgagaccgtgaccgcg
tcgctcgagagcgctgaggaacagtacgcgcagctcgaggaagaacaacgggaggtacag
ccgcgtgcccaggagtcacaggaaacttggtttgcactgtcatctctcgaggaacgggcg
aacgcgacgttgcgcatcgcacaggaacgcgcgcacaacctgaacacgcagactgagtac
cacgggcaagacccagaggagctgctcgctcgggcagcagcagcggacgaagaatatgag
gtggccattgaggctgccgaggaagccgcggagcgacttgaggttgttcgggaagacgtt
gccgaataccaggctgcgttcgatgaagctgaacgcgaacacgtggcgcagattcaggcg
gtagcggatcgccgtgagggcgttgtgcggctggtggcgcaagaggaggcgcaccagcag
gccgtgctcggaggtgagcaagaggcaacccggcttgaagagcagctttcactcagcagc
gagcgggcccacagcgcccgcggcgaagccgaggaggtagcggagaagattgctgagctt
gaagcccgccgagggccactcgtccatgagtacgagcaagcaagctcagagctcactgcc
gccgagcagcgctttcaggagctacagatgcagcaacgcgagcatgagcgggcggtgttt
acgctgcagtcgaagatagagacgctgcagcaccaaatgccaacacgtaccgcggaggag
atgctcgggggctatcccgcgcttgcatcactggtgaaggctcctgctgacctggcagga
gcgctggctgccgcgctgggtggcttcagtgaggcattggtgggcgagcgcgacttggac
gttgtggagcagctgcaatctgcagatcgtgccagcatcgttgaggcagtcggcggcgcg
ctgtggcgtgttgaaaccgacgggtgctatgactggctcctcgaccacctcgacgtcgac
gtttcggtcgcgggccccgtggcgcgcctgttagcagacgttgttgtagtggagacgccg
caggagggcgtggacgtcgtgaaggcagacccacgactgcgtgctgtgacgcgagagggg
gcactattcggcgaaggctggatgtcggtaggcatcgcgagcgcgtctacggtcgaggtg
agtgcgcaggttgaagccgcacagcgagacctacgcaccgcagagcacgcgttggcggag
ctctcgggcacgtttgagggagcgcagctcgcagccgaggacgcgcgggtgaatgttgcg
gcggcgaaggcagcgctgcgcgagcacgacaccgaggttgcttcgtggcagcgtgagcat
cagcgcttggctgcgcaatcggacacggccgagcaagagcgcgtccgtgccgcgcagcag
cttgaggaggcagagcagcggctcgctcagcgccgtgagcaactgctggaaacccaggag
cgtctttctcgcatcgacgacactcctgctgcggaaggcccttcgcccgaggcccgtgat
gctgcatcccagcaactgacgcaggcgaaggcgatcgaactggaagcggttctcgctgct
cgtgagacgcaacagcgcgctcagacaattgcggggaagggcgatgcgttgcggcgccag
gcggaaaacgagcgccaggcaaaagcgcgtcatgacgcagccgttgcacgtcggcggtcc
caggccctgctcgccggagccgtgaaggaacacacggaggcactgatctcgcgagtccag
gatgcattacaacgagccaccgcgcagcgcgatgagctgcagcgcacgcttgctgcgctg
cagggcaggattcaacaagagcgatcgcaggtcagcgctgctcgtcagcagctgaatcgg
ttgagtgaccgcgcgcacgccgcagacattgcaaggtcgcaggcgaaggtgcgtcttgag
gaagctcagcagaagatcgtcgagtcgctcggtatttcggtcgatgacttgctcgcgaac
ttcgcgccgggagaagactttgacgagtccactgagacccagcgactgcgccaggccgaa
aaagacttgcgctctttggggaaggtgaacccgctggctctcgaagagtttaaggcgctt
gaggaacgctatacgttcctctctacccagcttgccgatgtgattcaggctcgaaaggac
ttgctcgacgtcatcgaggatgtcgacgcccacatcctgcagctcttcacggatgcatgg
cacgacgtggaggaggagtttccacgtgtgttccatacgctgtttcccggtggggaagcc
cgcctgatactcacggaaccagatgacatgctgctcaccggcatcgagattgaggcgcgt
ccaccgggcaagcgcgtcaagcggctgtcactgctttcaggtggggagaagtcgctgact
gctctggcgtttctggtggcgattttccgagcgcgcccgagcccgttctacgtgctggac
gaggtggaggcagcgctcgatgacgtgaatctgcgccgattgatcgcgctgctcgaggag
ctgcggcaggactcgcagctcattgtgatcacgcaccagaagccgaccatgaatgtggcg
aacgtgctctacggtgtcaccatgcgcggtgatggtgtaacgagggtgctctcacaaaga
atgcgcccggcggggtcagctcctgactccgatccggacgcataa
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