KEGG   Corynebacterium sp. NML98-0116: BJP05_03890
Entry
BJP05_03890       CDS       T10271                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
corn  Corynebacterium sp. NML98-0116
Pathway
corn02024  Quorum sensing
corn03060  Protein export
corn03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:corn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    BJP05_03890
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BJP05_03890
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BJP05_03890
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:corn02044]
    BJP05_03890
Enzymes [BR:corn01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     BJP05_03890
Secretion system [BR:corn02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   BJP05_03890
  Eukaryotic Sec-SRP protein
   BJP05_03890
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA cobW MeaB AAA_25 AAA_22 AAA_30 AAA_31 APS_kinase AAA_16 MMR_HSR1 ArsA_ATPase Zeta_toxin AAA_18 nSTAND3 NPHP3_N NTPase_1 AAA_33 NACHT AAA_24 ABC_tran TsaE ATP_bind_1 6PF2K NB-ARC SLFN-g3_helicase MobB AAA Thymidylate_kin
Other DBs
NCBI-ProteinID: AOX05401
LinkDB
Position
893154..894755
AA seq 533 aa
MFESLSDRLQSALGGLRGKGKLTEADINATAREIRIALLEADVSLTVVRAFIKRVKERAL
GSDVSEALNPAQQVVKIVDQELTAILGGETRRLNFAKTPPTVIMLAGLQGAGKTTLAGKL
SRHLAKQGHTPLLVACDLQRPGAVQQLQIVGERAEVATFAPDPGTSIDSFEHEMGTSHGD
PVAVAQAGIEHAKQNKHDVVIIDTAGRLGIDETLMTQARNIRDAVQPDEVLFVIDAMIGQ
DAVTTAQAFADGVDFTGVVLTKLDGDARGGAALSIREVTGKPILFASTGEKLDDFDVFHP
ERMSSRILGMGDLLSLIEHAETVFDQKEAEEAASRLGTGELTLEDFLNQMLMIRRMGPIG
NLLKMMPGGKQMNQMADMVDEKQLDRIQAIIRGMTPQERANPKILNASRRKRIAAGSGVK
VSDVNQLVERFFEAKKMMGAMANQFGLPGMPGMGGGRSATKKKPKGRRGKNGKRKPAKRR
GGGPKMPGMPQMPGMPGMEDLQKMQEQLPPGMEGLDLNNLDFGAAMKRMGKKK
NT seq 1602 nt   +upstreamnt  +downstreamnt
gtgttcgagtcactgtctgaccgcttacaatcagcgcttggaggcttgcgcggcaaaggc
aagctcaccgaggctgacattaacgccacagcacgtgagattcggatcgcgctgctggag
gctgacgtctcgctgactgtcgtacgcgccttcattaagcgcgtgaaagagcgcgctttg
ggctccgacgtttcagaggcgctgaacccggcacagcaagtggtcaagattgttgaccag
gagctgaccgccattttgggcggagagactcgacgcctcaactttgcaaagacgccaccg
accgtcatcatgctggcaggtctacagggagctggtaagaccaccctggcaggtaagttg
tcccgccacctggcaaaacaaggacacacaccgctgctggtggcctgtgacctccagcgc
ccgggcgcggtgcagcagctccagattgtgggtgagcgcgccgaggttgcaacgttcgct
ccggatcctggcacgtccatagactcgtttgagcacgagatgggcacttcccacggcgac
cccgtcgcggtggcgcaggctggtattgagcacgcgaagcaaaacaagcacgacgtggtg
atcatcgataccgcgggtcgtttgggtattgacgaaacgctgatgacgcaggcccgtaac
atccgtgatgcagtccagcctgatgaagtcctgtttgtgatcgatgcgatgatcggtcag
gacgcggtcacgactgcgcaggccttcgcagacggcgtggactttaccggcgttgtgctg
acgaagctcgacggtgacgcccgcggtggtgcagccctgtccatccgtgaagtcaccggc
aagccgatcctattcgcgtccacaggtgagaagctcgatgactttgatgtcttccacccg
gagcgcatgtcgagtcgcatcctcggtatgggcgacctgctctcactcattgagcacgcg
gagaccgtcttcgaccagaaggaagctgaggaggccgcgagccgactcggcactggggag
ctcacgcttgaagacttcctgaaccagatgctgatgatccgccgcatgggcccgatcggc
aatctgctcaagatgatgcctggcggcaagcagatgaaccagatggcggacatggttgat
gagaagcagctggaccgcatccaggcaatcatccgcggtatgacgcctcaggaacgcgcg
aacccgaagatccttaatgcgtcgcgcaggaagcgcatcgctgctggttccggcgtgaaa
gtctctgacgtcaaccagctcgttgaacgctttttcgaggcgaagaagatgatgggcgcg
atggccaaccagttcggcctaccaggaatgccgggcatgggtggcggacgctccgcgacg
aagaaaaagcccaagggacgcaggggcaagaacgggaagcgcaagcccgcgaagcgccgt
ggtggaggcccgaagatgccgggcatgccacagatgccgggcatgcctggcatggaggat
ctgcagaagatgcaggaacaacttcctccgggtatggaggggcttgacctcaacaatctt
gacttcggcgcagcgatgaagcgcatgggcaagaagaagtag

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