Corynebacterium sp. NML98-0116: BJP05_04130
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Entry
BJP05_04130 CDS
T10271
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
corn Corynebacterium sp. NML98-0116
Brite
KEGG Orthology (KO) [BR:
corn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
corn03016
]
BJP05_04130
Enzymes [BR:
corn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BJP05_04130
Transfer RNA biogenesis [BR:
corn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BJP05_04130
Prokaryotic type
BJP05_04130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AOX05443
LinkDB
All DBs
Position
complement(945025..945918)
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AA seq
297 aa
AA seq
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MSDPLATSGIVVIDKPQGLTSHDVVARLRRAFGTRKVGHAGTLDPMATGVLVVGIERGTK
LLAHLVAETKTYEATIRLGAATTTDDAEGEVVSTSPTDAVTDADIIDAIDSFRGDIMQRP
SSVSAIKIDGKRAHQLVREGHDVEIPARPVTIHEYSILGIARVDTWIDVDVRVHCSSGTY
IRALARDLGETLHTGGHLTALRRTTVGPFNLEHALELEDIQAHPRFSLTLDEACATCWPV
LPVTNDEYDALAMGKWLEPRGLSGVHAAQRDDGRVVALVKESKKRLATVFVARPSTL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcccctcgctacatctggaattgttgtcatcgataagccccaaggcctcaca
agccacgacgtggtcgcacgccttcgccgtgctttcgggacccgcaaagtcggtcatgcc
ggaaccttggatccgatggcgactggagtactggttgtcggtatcgaacgtggcacaaag
ctcctcgcccacctcgtcgcggaaaccaagacgtacgaggcaaccattcggctcggtgcc
gccaccacgacggatgacgccgagggcgaggtcgtcagcacctcccccaccgatgcagtc
actgacgccgacattatcgacgccatcgacagcttccgcggcgatatcatgcagcgtccc
tcaagcgtgtccgcaatcaaaatcgacggcaagcgcgcacatcagctcgtccgcgaagga
cacgatgtcgagatcccagcccgaccagtaacaattcatgagtacagcattttgggcatc
gctcgcgtcgatacctggattgacgtcgatgtccgtgtgcactgctcctcggggacgtac
attcgcgcgctcgcacgcgatctaggtgagaccctacacaccggcgggcacctgactgcg
cttcgccgaaccacagtcgggccctttaacctcgagcacgcattggagctggaagacatc
caggctcacccgcgcttcagcctcaccctcgacgaagcctgcgctacctgttggccggta
ctgcccgtcaccaacgatgaatacgacgccctcgctatgggcaaatggctcgaacctcgc
ggactttcgggtgtacacgctgcacaacgtgacgacggccgcgtcgtcgcccttgtgaaa
gaatccaagaagcgtcttgccacggtgtttgtcgcgcgcccatccacgctgtag
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