Corynebacterium sp. NML98-0116: BJP05_04400
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Entry
BJP05_04400 CDS
T10271
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
corn Corynebacterium sp. NML98-0116
Brite
KEGG Orthology (KO) [BR:
corn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BJP05_04400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
corn03021
]
BJP05_04400
Transcription machinery [BR:
corn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BJP05_04400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
SseC
DUF6465
Motif
Other DBs
NCBI-ProteinID:
AOX05486
LinkDB
All DBs
Position
complement(1003515..1004954)
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AA seq
479 aa
AA seq
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MVASEASGKNSVNDAAESTSGGVTDGTTTAKKATKKAAKKTAKKAAKKTAKKTAKKTARK
TAKKASKVAKKAKKTVKKTAAKKAASPATDEVTSDDSALEETDESLDDSDQEQDFDPLTA
EEDDEEFDEHLGDDDEEKEDEEDDGSSVWDIEESAALRQARKDAQLTASADSVRAYLKQI
GKVALLDAEQEVSLAKRIEAGLYAQHRLDEMARAAEEGDKEARLTPAVKRDFRAVARDGR
KAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYSKGYKFSTYATW
WIRQAITRAMADQARTIRIPVHMVEVINKLGRIQSELLQDLGREPTPLELAKEMDITEEK
VLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQDVLHTLSE
REAGVVRLRFGLTDGMPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
gtggtagccagcgaagcttcaggcaaaaactccgtcaacgatgcggcagagagcacttcc
ggcggcgtaaccgacggcacaacgaccgccaagaaagccaccaaaaaagcagccaagaaa
accgccaaaaaggctgccaaaaagaccgccaagaagactgcgaagaaaacagcacgcaaa
accgcgaaaaaggcgtcaaaggtagctaagaaagcgaagaagacagtaaagaaaaccgcc
gcaaagaaggctgcttcacccgcaactgatgaggtcaccagcgacgactccgcgctggaa
gaaacggacgaatcgctcgacgattctgaccaggagcaggacttcgacccgctgacggct
gaagaagatgacgaagaatttgacgagcatcttggtgatgacgacgaggaaaaagaagac
gaggaagacgacggatcttctgtctgggatatcgaggaatctgctgcacttcgccaagcc
cgcaaggacgctcagctcaccgcatctgcggactctgtccgtgcgtatttgaagcaaata
ggtaaggttgctctgctcgatgctgagcaggaggtttctctcgcgaagcgcattgaagct
ggtctctacgcgcaacaccgactcgacgagatggcccgtgcagctgaggagggagacaag
gaagcacgccttacccctgcggttaagcgcgacttccgcgccgtcgcccgagacggtcgc
aaggcgaagaaccatctgctcgaggctaaccttcgactcgtggtttcgctggcaaagcgc
tacaccggtcgcggtatggccttcttggacctcatccaggagggcaacctcggtctcatc
cgtgcagttgaaaagttcgactattccaagggctacaagttttccacctatgcaacgtgg
tggatccgccaggcaattacacgtgccatggcagaccaggctcgaaccattcgcatcccg
gtacacatggtcgaggtcatcaacaagcttggccgtatccagagtgagcttctacaagat
cttggacgcgaacctacaccgcttgaactcgcaaaagagatggacatcaccgaagagaag
gtgttggagatccagcagtacgcccgtgagccgatctcattggatcagacgatcggcgat
gaaggcgacagccaactcggtgatttcatcgaagactccgaagccgttgtggcagtcgac
gctgtttcctttacgcttcttcaggaccaacttcaggatgtcctccacacactttccgag
cgtgaggccggcgtagtgcggctccgcttcggcctgaccgatggcatgcctcgcacgcta
gatgaaatcggccaggtgtacggtgtgacacgcgaacgcatccggcagatcgagtccaag
acgatgtcgaagcttcgccacccgtcgcgttcacaggtgctgcgcgattacctcgattaa
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