Corynebacterium sp. NML98-0116: BJP05_05470
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Entry
BJP05_05470 CDS
T10271
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
corn Corynebacterium sp. NML98-0116
Pathway
corn03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
corn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJP05_05470
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BJP05_05470
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AOX05660
LinkDB
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Position
complement(1222893..1225745)
Genome browser
AA seq
950 aa
AA seq
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MADRLVVRGAREHNLKGVDVSLPRDKMAVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARMFLGQMDKPDVDYIDGLSPAVSIDQKSTNRNPRSTVGTITEIYDYLRLLYSRAGTPH
CPECDAVIERQTPQQIVDRVLGMEERLKFQVLAPAVRKRKGEFVDLFKDLAAQGYSRVSV
DGELYQLSDPPKLEKQVKHTISVVVDRLQVKQSQKQRLTDSVETALKLADGLVGFEFVDF
DEGNPDRIQIFSEKMACPNGHKLNVEEYEPRAFSFNSPFGACPTCDGLGTQKKIDEELVI
PDPDAPAIDAFQPWNSSPNKRYFVKLIEALAKEEGFDAHAPFSSLTKTQQKHLVNGSKTK
ISVRYKNRYGRQRSFSAAYEGVIGYLERKLEQAESDTQKDRLLAYTREVPCPSCKGARLK
PEILAVRLDSTTHGERSIAGLTELSIEDASEYLDNLVLGYREEMIAGAVLREIQARLHFL
LDVGLSYLSLARSAGTLSGGEAQRIRLATQIGSGLAGVLYVLDEPSIGLHQRDNQRLIKT
LKKLRDLGNTLVVVEHDEETIREADWLVDIGPLAGEYGGEVVYQGEPDGIREVENSITGD
YLAGRKKIEVPDQRRPVDADRKLRVEGARENNLKNVSVDIPLGVLVAVTGVSGSGKSTLV
NQILAKTLQNELNGARQVPGRVKKVSGLDHLDKLVQVDQSPIGRTPRSNPATYTGVFDKI
RNLFAETQESKVRGYKAGRFSFNVKGGRCEACRGDGTIKIEMNFLPDVYVPCEVCQGARY
NRETLEVRYKGKNIAEVLDMPISEAAEFFEPIQSIHRYLNTLVDVGLGYVRLGQAATTLS
GGEAQRVKLAAELQKRTNGRTIYILDEPTTGLHFEDIRKLMLVLNGLVEKGNTVLVIEHN
LDVIKSADWVIDMGPEGGSGGGTVVAQGTPEDVARNGKSHTGAFLKEILQ
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaccgtcttgttgtacgtggtgcaagagaacacaacctgaagggcgtcgatgtg
tctctgccgagggacaagatggccgtatttacaggcctgtctggatcgggtaagtcctcg
ctggcattcgatacgatctttgcggagggacagcgtcgatacgttgagtctctttcgtcg
tatgctcggatgttcttaggacagatggataagcccgatgtcgattacattgacgggcta
tcgcccgcggtatcaatcgaccaaaaatcgacgaaccgtaacccccgttcgactgtaggt
accatcaccgaaatctacgattaccttcgcctgctctattcgcgggctggcactcctcat
tgtccagagtgcgacgctgtgattgaacggcagacgccgcaacaaattgtggaccgcgtg
ctggggatggaggagcgcctcaagttccaagtccttgccccggcagtacgaaagcgtaaa
ggcgagttcgttgacttgtttaaggatctcgccgctcagggttactctcgagtgagcgtg
gacggcgagttgtaccagctcagcgatccaccgaagcttgagaagcaggtcaaacacacg
atttcggtggtagtggaccgccttcaagtgaagcaaagccaaaagcagcgtctcaccgac
tcagtggagacagcactcaaacttgccgacggcctcgttggcttcgaattcgttgacttc
gatgagggcaaccctgatcggatccagatcttctctgaaaagatggcgtgcccgaacggg
cacaaacttaacgttgaggagtacgagccgcgcgcgttctcgtttaactcaccgtttggt
gcctgtccaacgtgtgatggtctcgggacgcagaagaagattgacgaagaactcgttatt
ccagatccagacgcaccagcaattgatgctttccagccatggaactccagcccgaacaag
cgatacttcgtcaagttgattgaagcgttagcaaaagaggagggctttgatgctcacgct
ccgttcagctcgctgacgaaaacgcagcagaagcatttggtaaatggttccaaaaccaag
atcagcgtgcggtacaagaaccgctacggcaggcagcggtcattcagcgcagcttatgaa
ggcgtcattgggtacctggagcgtaagctcgagcaggccgaaagcgatacccagaaagac
cgactgcttgcttatacgcgagaggtaccgtgtccttcgtgcaagggcgctaggttgaag
cccgagattctcgccgttcgcctcgactcaacaacgcatggtgaacgctccatcgccggg
cttacggaactgagcattgaggatgcgtccgaataccttgataatttggtacttggctac
cgtgaggaaatgatcgcgggtgcggtacttcgagagatccaagctcggctgcactttctc
ttggacgtaggactgagttacctctcgctcgctcggtcagccggcaccctgtcgggcggt
gaagcgcagcgcatccgtctggccacgcaaattgggtctggccttgccggtgtactgtac
gtgcttgatgagccgtcaatcggtttgcatcaacgggataaccagaggctgattaagact
ctgaagaaacttcgcgaccttgggaacacgctggttgtggttgaacacgatgaggaaacg
atccgtgaggctgattggttggtagacatcgggccgctcgccggagaatacggcggggaa
gtggtctaccagggagaacccgacggtatccgtgaagtagagaactccattaccggagac
taccttgcgggcaggaaaaagattgaggtcccggatcagcgtcgaccggtagacgcagac
cgcaagctgagagttgagggcgcgcgagagaacaacctcaagaacgtatcagtggatatt
ccactgggagtgttggtagctgttactggggtatctgggtctggcaagtctacgctggta
aaccagattctggctaagactctccagaatgagctcaatggagctcgacaagtcccggga
cgggtaaagaaagtcagtggccttgaccatctcgataaacttgtccaagtcgaccagagt
cccatcggacgtacaccacgatcaaaccccgcgacatatacaggggtgtttgacaagatc
cgcaacctattcgcggaaacacaagagtcaaaggttcgcggctacaaggctggccgattc
tcgttcaatgtcaaaggcgggcgctgtgaagcgtgccgtggtgatggcactatcaagatt
gagatgaacttcctaccggatgtatacgttccgtgtgaggtgtgccagggagcacgatac
aaccgtgaaaccctcgaagtgcgctataagggtaagaacattgccgaagttctcgatatg
ccgatttctgaagcagctgagttcttcgagccaattcagtcaatccatcgatacctcaac
acgcttgtagacgtcggcctgggctatgtacgtcttgggcaggctgcgacaacgctatcc
ggtggtgaggcacagcgggtgaagctggcggcagaattgcagaagcgaactaacggccga
acaatttacatcctcgacgagcccactacggggctgcacttcgaagacattcgtaagctc
atgcttgtgctgaatggcctggtggaaaagggcaacactgtgttggtgatcgaacacaac
ctggacgttatcaagtcggcggactgggtgattgacatggggcctgaggggggatcaggc
ggtggaacggtggtcgcgcagggaacgccagaagacgtagcacgtaatggcaagtctcat
acaggtgctttcttgaaggagatattgcaatag
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