Corynebacterium sp. NML98-0116: BJP05_05865
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Entry
BJP05_05865 CDS
T10271
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
corn Corynebacterium sp. NML98-0116
Pathway
corn03030
DNA replication
corn03430
Mismatch repair
corn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
corn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BJP05_05865
03430 Mismatch repair
BJP05_05865
03440 Homologous recombination
BJP05_05865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
corn03032
]
BJP05_05865
03400 DNA repair and recombination proteins [BR:
corn03400
]
BJP05_05865
Enzymes [BR:
corn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BJP05_05865
DNA replication proteins [BR:
corn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BJP05_05865
DNA repair and recombination proteins [BR:
corn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BJP05_05865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF1838
ChaB
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AOX06701
LinkDB
All DBs
Position
1305983..1306666
Genome browser
AA seq
227 aa
AA seq
DB search
MAFFDASRMMSFDLETTSVNPRTARIVTSSLVTIDGAQANAHEALADPGVEIPAEAAAVH
GITTEYARAHGRPHDEVLQETVDMIKRGWEDGLTLIVFNAPYDLSVLRQLTGDFTVTGPV
FDPLVIDRAKDRYRKGKRNLGALCELYGVKLDNAHDATADATAAARLAWKQVRSTYPELA
QMSTDELMEFQAVEYYKLQTELREFFESKGRDVSNLTTSWPMIGDAS
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggctttcttcgacgcatcccgcatgatgtccttcgacctcgagacgacttctgtgaac
ccacgcactgctcgtattgtgacgtcctcccttgtcacgatcgacggtgcgcaggcgaac
gcgcacgaggcgctcgcggacccaggggttgagatacccgcagaggctgccgcggtccac
ggcatcaccacggagtacgcccgcgcgcacggccgcccgcacgatgaggtcttgcaagaa
acagttgacatgattaagcgcggttgggaggacggcctcactctcatcgtttttaacgcg
ccgtatgacctttctgtgctgcgacagctcaccggagacttcactgtaaccggcccggtt
ttcgaccctctcgtcatcgaccgggcgaaggaccgctacaggaaggggaaacgcaacctc
ggcgctctgtgcgagctgtacggagtgaagctcgacaacgctcacgatgcgacggctgat
gcgaccgccgctgcgcgccttgcgtggaagcaggtccgctccacctaccctgaactcgcc
cagatgagcacggacgagttgatggagtttcaggccgtggagtactacaaactccaaaca
gagttgcgggagttcttcgagtcgaaggggcgtgatgtctcaaacctcacgacgtcgtgg
ccgatgatcggggatgcgagttag
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