Corynebacterium sp. NML98-0116: BJP05_06205
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Entry
BJP05_06205 CDS
T10271
Name
(GenBank) ATP-dependent helicase
Organism
corn Corynebacterium sp. NML98-0116
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
DEAD
ResIII
SWI2_SNF2
DUF2514
Motif
Other DBs
NCBI-ProteinID:
AOX06707
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Position
complement(1381880..1385005)
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AA seq
1041 aa
AA seq
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MPKFLLHGLWLPDSGLQVWVEQVAGHKIITLDEVPKGTFPEPVHTLLEGVKFRHRGKVML
RTPKGKLLRLRVPTAAFAPDEAVQFLRAMSFLLDPDVPAPEGLTEQQRASVAPDLLWLIQ
MFLGLERFVQAGRVSIHVPSQDFQWFAQWQLGTGVEERGWLADMIAAAPGVLTENNRRLD
EDCSRTFVHWIASAQLRNSPMLRGERPFPWHDFVQSLLNGTPLRRGSSAFSRQMSQWNGS
ITATNFQLVFIVEQPADAEDGGDEALTQWPIRVNVRSGDESPRPIRLSEYDAYTVQQLHS
VLRDAIRVSDLIDPSTHRRAATTPGSALDGDWDVYLSAEEIVQFVETEVSKLRLANYAVM
LPRAWTTAETTSKLHLSEAKNPYDATAVTRLGFGQLVNYDWRVSIGGTELTDDEMQRLVE
SKSGLIKLRGEWVLADTRHLERTKRYMEKLHGTALARAKREAEEARTTAQLAADAGADDA
EALAARADQLEEEYQKLEASEEHGAVTAEELRQLALESGPDSPLEFTGSRWFTSLVGGMD
RPAPERVDIPRTVHAELREYQRRGVDWLYYMSRNHLGAVLADDMGLGKTLQLLTLLAVEE
ERGQRTGPTLVVAPTSVVGNWAREAAKFVPHLSIYVHHGSARYKGEELREALKKHDVTIT
SYGIASRDVIDLSLIEWDHVVLDEAQAIKNAGTRASKSVRALPARHRIALTGTPIENKLS
ELRSLLDFVNPGILGSQSFFRNHFARAIESRRDEGLADEMGERLQRLTAPFILRRLKTDT
AIIDDLPDKAEHVLTVDMTAEQAALYTALVDRMQRELQERKGMARKGLVLATITRIKQIC
NHPAHFLGDGSPVLADGHHRSGKVARLVELLNEAVRTDQRVLIFTQYKAFGDILRPYLSD
YLGELIPFLHGGVGKSARDAMVAHFQEPDGPRAMLLSLKAGGTGLNLTAASMVIHLDRWW
NPAVENQATDRAFRIGQKKDVTVYKMITRGTMEESIQDILDGKMHLAGAVIGEGEGWITE
LDADDLAQLMSYRGNGGERNL
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
ttgccaaaattccttcttcacgggctgtggctgccagattctggcttgcaggtctgggtc
gagcaggtggctggccataaaatcatcacactcgacgaagtgccgaaggggaccttcccc
gaaccagtccacacactgctcgaaggggtcaagttccgccaccgcggcaaggtcatgttg
cgcacgccgaaaggcaaactattgcggctccgggtgccgacggcagcattcgcccccgat
gaggcagtacagtttctacgagcaatgtccttcctcctggacccagacgttccggcaccg
gaagggctcacggagcaacagcgggcgtcggtagccccggatcttttgtggctcatccag
atgtttctcgggcttgagcggtttgtacaggctggcagggtatcgattcacgtgccgtct
caggactttcagtggttcgcgcagtggcagctcggcaccggggtggaggaacgcggttgg
ctcgcggatatgattgcggctgcgccgggagtacttacggagaacaaccgacggctcgac
gaagactgctcgcgcacatttgtgcactggatcgcgtctgcccagctgcgtaactcccct
atgctgcgtggtgagcgcccgtttccgtggcacgattttgtacagtcgctgcttaacggg
acgccgctacggcgaggctctagcgcgttttcgcgacagatgagccagtggaacggctca
atcactgcgacgaatttccaactggtgttcatcgtggagcagcccgcagacgcagaagat
gggggcgatgaggcgctcacgcagtggccgattcgggtgaacgtgcgctccggggacgag
tcgccgcggcccatccggctgtcggagtatgacgcctatacggtgcagcagctccactcc
gtgcttcgcgacgccatcagggtctccgacctgattgatccatcgacgcaccggcgtgcc
gcgacaacgccgggctctgcgctcgatggcgactgggacgtgtacctgtccgcggaagag
attgtgcaattcgtggagactgaggtgagcaagcttcggcttgcgaactacgcggtgatg
ctgccacgcgcctggacaactgcagagacaacatcgaagctgcacctttcggaagcgaag
aacccgtacgacgcaacagcggtgacccggcttggcttcggccagctggtcaattacgac
tggcgcgtcagcatcggcggcactgaactgacggatgacgaaatgcagcggctcgtcgag
tcgaagtctgggctgatcaagttgcgtggcgagtgggtgctcgccgatacacggcacctc
gagcgcacgaagcggtacatggagaaactccacgggacggcgcttgcgcgggccaagcgt
gaagcagaagaagcccggacgactgcgcagctcgcagctgatgcgggagcagatgacgcc
gaagcgctcgctgcccgcgccgaccagctcgaggaggagtaccagaaactcgaagcgtca
gaggaacacggtgcggtaaccgcggaggagctgcgtcagcttgcgctggagagtgggcca
gactcgccgcttgagttcactggttcccgttggtttacgtctctggtcggcggaatggac
cgcccggcgccggagcgcgtcgacatcccaagaactgtgcatgctgagctccgcgagtac
cagcgtcgtggcgtggattggctctactacatgtcccgcaaccacctaggtgccgtgctt
gccgatgacatggggctcggtaagacgctccagctgctcaccctgcttgccgtcgaagag
gaacgcgggcagcgcaccggaccaaccctcgttgttgcgccgacctccgtggtgggcaac
tgggcacgcgaagccgcgaagttcgtgccgcacctttctatatatgtccaccacggcagt
gcccggtacaaaggagaggaactgcgtgaggctctcaagaagcatgacgtcaccatcacc
tcctatgggatcgcatcgcgcgatgtgatcgacttgtctttgatcgaatgggaccatgtg
gtgctcgacgaagctcaggcgattaagaatgcggggacgagggcgtcgaaaagcgtgcga
gcgctgccagctcgccaccgtatcgcgctgacaggcaccccgattgaaaacaagctctcc
gagctgcgcagtctcctcgactttgtgaaccccggcatcctcggctcgcagtccttcttc
cgcaaccacttcgcacgggcaattgagtcgcgccgggacgagggcctcgccgacgagatg
ggggagcgcctgcagcgcctcaccgcgccgtttatcctgcgcaggctgaagacggacacc
gcgatcatcgatgacctgccggacaaggctgagcatgtactgacagtggacatgactgcg
gagcaagcggcgctctacacggcactcgttgaccgcatgcagcgcgaactgcaggaacgc
aagggtatggcgcgtaaaggtctcgtgcttgccacgatcactcgcatcaagcagatctgc
aaccacccggctcacttcctgggcgatggatcaccagtacttgccgacggccaccacagg
tccggtaaggtcgcccgccttgtggagctgctcaatgaggcagtgcgtaccgaccaacga
gtgttgatctttacccagtacaaagcgtttggtgacattctgcggccctacctgagcgac
tacctcggtgagctcatcccgtttctccacggtggggtaggaaagagcgcgcgcgatgct
atggttgcgcacttccaggagccggacgggccgcgcgcgatgctgctgagtcttaaagca
ggtggtaccggactcaacctgactgctgcatcgatggtgatccaccttgaccgttggtgg
aatcccgccgtggaaaaccaggcgacggaccgcgcgttccgcattggccagaagaaagac
gtcacggtgtacaagatgattacgcgcggaaccatggaggaatcgatccaagacatcttg
gatggcaagatgcacctggcaggtgcggtgattggcgagggcgaaggctggattacggaa
ctcgacgctgacgatctggcacagctgatgagctaccgaggaaacggaggcgagcgcaac
ctatga
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