Corynebacterium sp. NML98-0116: BJP05_07260
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Entry
BJP05_07260 CDS
T10271
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
corn Corynebacterium sp. NML98-0116
Pathway
corn03420
Nucleotide excision repair
corn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
corn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BJP05_07260
03430 Mismatch repair
BJP05_07260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
corn03400
]
BJP05_07260
Enzymes [BR:
corn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJP05_07260
DNA repair and recombination proteins [BR:
corn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJP05_07260
MMR (mismatch excision repair)
Other MMR factors
BJP05_07260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_16
DEAD
Motif
Other DBs
NCBI-ProteinID:
AOX05974
LinkDB
All DBs
Position
complement(1595098..1597428)
Genome browser
AA seq
776 aa
AA seq
DB search
MNDLTLGLNPQQEAAVRHSGSPLLIVAGAGSGKTAVLTRRIAFLLQERGVAPWQVLAITF
TNKAAAEMKERVAALIGPQTERMWVATFHSICVRILRQQAQLVPGLNTNFSIYDADDSRR
LLSMIAKENNLDLKKFSPRVLANAISNLKNELIDEQQAADDAQRTHNPFDSTVAKVFVEY
QRRLRAANAVDFDDLIGEVVRIFKEHPQVADYYRRRFRHVLVDEYQDTNHAQYELIHTLV
GKGPEASELAVVGDSDQSIYAFRGATIRNIEEFERDYPDATTIVLEQNYRSTQTILDAAN
AVISQNTGRRPKKLWTDHGTGDQIVGYVADNEHDEARFIAGEIDRLTDSGVPYSDIAIMY
RTNNASRALEDIFIRTGIPYKVVGGTRFYERKEVRDIVAYLKALENPDDTVSLRRIINEP
KRAIGDKAQSTVALYAQTYSVSFGQALRVAADGGIDALGTRAKNAINGFVTMMDELREEM
TADQQEGASNADLGELVSTILDVTGYKAQLEQSNDPQDATRLDNLNELVSVAREYSSESA
LQLAYLSDEEISEIFDEGEPLPGTLQAFLEKVALVADADQLPENDQGVVTLMTLHTAKGL
EFPVVFVTGWEDGQFPHLRALGDPAELAEERRLAYVGITRARKRLYLTRAMVRSSWGSPV
TNPASRFLGEIPQELIDWKREEPTYSSGSSHSPWSTGGRSRSNGFGRSQSRGGSSRTKVN
KDLQLAVGDRVNHAKYGLGTVLAVDGAGVRETVTIDFGSSGTVRLMLIGGVPMEKL
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatctgacgctaggactcaacccccaacaggaagccgccgtgcgccacagcggc
tcgcctcttctgattgtcgcgggcgctgggtccggcaaaaccgcagtgctgaccaggcgt
atcgcattcctactgcaggaacgaggcgtcgcgccctggcaggtcctggcgatcacattt
accaacaaggccgccgcggagatgaaggagcgcgtcgcggcgctgatcgggccgcagacc
gagcggatgtgggtggcaacctttcactcgatctgcgtgcggatccttcgccagcaggcc
cagctcgttcctggcctgaacacgaacttcagtatctatgacgccgacgattctcgccga
ctgctctcgatgattgccaaagagaacaatctcgacctgaagaagttttcaccccgggtg
ctcgcgaatgcgatctcgaacctcaagaacgagctcatcgacgaacagcaggcggccgac
gacgcgcagcgcacccacaacccattcgattccactgtggccaaggtgtttgttgagtat
cagcgccgcctgcgcgccgcgaacgctgtcgacttcgacgacctcatcggggaggtcgtg
cggatttttaaggagcacccgcaggttgcggattattatcgacgccgcttccgccacgta
ctcgtggacgagtaccaggacacgaaccatgcgcagtacgaactcatccacaccctggtg
ggcaaggggcctgaggcttctgagcttgccgtagttggcgactccgaccagtcgatttac
gcgttccgtggcgcgacgatccgcaacatcgaggagtttgagcgcgactaccccgacgca
accaccatcgtgctggagcagaactaccgctcgacgcaaaccatcttggacgctgccaac
gcggtgatttcccagaacaccggtcggcgcccgaagaagctgtggacggaccacggcacc
ggcgaccagatcgtcggctacgtcgcggacaacgagcacgacgaggctcggtttatcgct
ggcgagatcgaccggctcacagacagtggagtgccctactccgacatcgcgatcatgtac
cgcaccaacaatgcatcgcgtgcgttggaagacatcttcattcgcaccgggatcccgtac
aaggtggtaggcggcacgcgcttctatgagcgcaaagaggttcgcgatatcgtggcctac
ctcaaggcgctagaaaacccggacgacacggtcagcctgcgcaggattattaacgagcca
aagcgtgccatcggggataaggcgcagtccacggtggcgctgtacgcgcagacctactcg
gtgagcttcggccaagcgctgcgggttgcggcagatggcggcattgacgcactgggtacg
cgcgcgaagaacgccatcaatggttttgtcaccatgatggatgaattgcgcgaggaaatg
acagcggaccagcaggaaggggcgagtaacgctgacctcggggagctggtctccacgatt
ctggacgtcaccgggtacaaagcgcagttggagcagtcgaacgacccacaggacgcgacg
cgcttggacaacctaaacgagttggtgtccgtcgcgcgcgagtattcctcggagtctgca
ctgcagctggcgtacctcagcgacgaggaaatttcggagatcttcgacgagggtgaaccg
ctgccaggaaccctacaagccttcctggagaaggtggcgctcgtcgctgacgccgatcag
cttcctgagaatgatcagggcgtagtcacgttgatgacgctgcacaccgcaaagggtctt
gagttccccgtcgtgtttgtgactgggtgggaagacgggcagttcccgcacctgcgcgcc
ttgggggatccggcggagctcgccgaagagcgtcgcctggcgtatgtcggcatcacccgt
gcgcgcaagcgcctttacctgacgcgcgcgatggtgcggtcctcatgggggagcccggtg
acaaacccggcgagccgattccttggggagattccgcaggaactcatcgattggaagcgt
gaggagcccacgtattcttcgggctcttcgcattcaccgtggtcaactggtggccggagc
cgcagcaacgggtttgggcggtcgcagtcgcgcggcggtagcagcaggaccaaggtgaac
aaggacctgcagctggcggtcggggaccgggtcaaccatgcaaaatacgggctgggtacc
gtactggccgttgatggtgcgggagtgcgagaaaccgtgacgattgactttggttcctcc
gggacagtccgcctgatgctgatcggcggcgtcccgatggagaagctctaa
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