Corynebacterium sp. NML98-0116: BJP05_07725
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Entry
BJP05_07725 CDS
T10271
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
corn Corynebacterium sp. NML98-0116
Pathway
corn03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
corn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJP05_07725
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BJP05_07725
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AOX06731
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Position
complement(1691679..1694207)
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AA seq
842 aa
AA seq
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MIRVRDAHLHNLKHIDVDLPRDTLVAVTGVSGSGKSSLAFGTIHGEAQRRYLESVSPFAR
RLIGGAVNPRVGSVAGLPPTVALQQSTTLGGARSSVGTISNMSNSIRLLFSRSGSYPDGM
RERLEYGRLDSDAFSPNTTAGMCPECQGTGTVHRPTEASMVPDPSLSIWDGAIAAWPGAW
LGKNFRDILGTLGYPLDVPWRDIPQEDRDWILFTDEQPVVTVHPVRDENAVHGSYKGKWR
SVATYLTDTLAETESDKNRRRVLSFMHSSTCPTCQGRGFQPDTLQVTYAGYAIDEFNALA
LKDVLAVLEDRLERLEGIAEQEWNEHDEAEELLLDQVLPTVRAANELGLGHLSLSRPARS
LSAGEHQRLRLASQLNSSLFGTTYVLDEPSAGLHVVERKAVSELLQRFIDAGNSVLLVEH
DMSLVAGCDWIVDIGPRAGERGGELVFSGPTSQFRANADELGSPTAIALNADFPELTDTP
ADTGASISLRGVHARAFDGADVDFPLGALTAVTGVSGSGKSTLVIGVLADVVSRSAKQVV
GAEEASDGDADAELTAGSDPSEDFRVDNVEGVDKIRRLVHITQKPIGRTVRSTVATYTGL
FDHVRRLFAATPEAKQRGMSVSDFSYNTTKGRCPECDGAGSIEVELVFLPGTYTTCPACH
GKRYKPEILEVQWNGRSIADILALTVDEALEVFAEEPKVLRSVEFLHALGLGYLRLGQGS
PELSGGEAQRIKLASEMQRGSSRKHSLYLLDEPTTGLHPADVDLLLAQLRRLVDDGATVV
VVEHDLRVVAQADHIIDVGPGAGDEGGQILATGTPAAVAQQGTDPDSRSVTAQVLAERAG
LR
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgattcgggtgcgtgatgcgcacctgcacaacctgaaacacatcgacgtcgacctgccc
cgggataccctcgtggcggtcaccggtgtgtcgggttcgggcaagtccagtctggcgttc
ggcaccatccatggggaggcgcagcgccgctacctggagtctgtgtcgccgtttgcgcgg
cgtctgatcggtggtgcggtcaacccgcgcgtcggctcggtcgcgggtctgccgccgaca
gtggcgctgcagcagtccaccaccctgggtggagcgcgttcctccgtgggcacgatctcg
aatatgtcgaatagtattcggctgctcttttcccgctctggcagctacccggatggcatg
cgtgagcggctggaatacggcaggctcgactctgacgctttctcgcccaacaccaccgcg
ggcatgtgccctgagtgccagggcaccggtaccgtgcaccggccgacggaagcgtcgatg
gtgccggatcccagcctgtctatctgggacggcgcgattgccgcgtggccgggggcgtgg
ttggggaagaacttccgggacatcctgggcaccctcggctacccgctggacgtcccgtgg
cgggatattccgcaggaggaccgcgactggatcctgtttacggacgagcagccggtggtc
accgtccacccggtgcgggatgagaacgctgtgcatggttcctataaaggtaagtggcgt
tcggttgccacgtacctcacggacaccctggcggagacggagtcggataagaaccgtcgt
cgggtgctttctttcatgcattcatcgacgtgcccgacgtgccagggccgcgggttccag
ccggataccttgcaggtcacctacgccggttacgccatcgatgagttcaacgccttggcg
ttgaaggacgtgctggctgtcctggaggatcgcctggagcgcctggagggcatcgcggag
caggagtggaacgagcacgacgaggccgaagagctgctgctggatcaggtgctgcccacg
gtgcgcgcggcgaatgagctggggctgggccacttaagcctctctcgtccggcacggagc
ttgtctgccggcgagcaccagcgcctgcggttagcatcccagttgaactcgagcttattc
ggcacgacctatgtgctggatgagccctcggcgggcttgcacgtggtggagcgcaaggct
gtctctgagttgctgcagcgcttcatcgacgccggtaattcggtgctgctggtggagcac
gacatgtccctagtggccgggtgcgattggattgtggacatcggcccccgcgcaggggag
cgcggcggggagctggtgttctccggcccgactagccagttccgcgcgaacgccgatgag
ctgggctcgcccacggcgatcgccctgaatgcggacttccccgagttgacggacactccg
gccgacaccggtgcatccatcagcctgcgcggtgtgcacgcacgcgccttcgacggcgcc
gacgtggacttcccgctgggagcactcaccgcagtcacgggagtatccggttccggcaaa
tccaccctggtcatcggggtgctggcggacgtggtgtcccgctctgcaaagcaggtggtc
ggcgccgaggaggcatcggacggggatgcggatgctgagctcacggcaggatccgatccc
tctgaggatttcagggtggacaacgtagagggcgtcgataagatccgccggttggtgcac
atcactcagaagccgattgggcgcacggtgcgttccaccgtggcgacctacacggggctt
ttcgatcacgtccgcaggctcttcgccgcgacccccgaggctaagcagcgaggcatgtcg
gtgtcggacttttcctataacacgacgaagggccgctgcccggagtgcgatggtgcgggc
agcatcgaggtcgagctggtgttcctgccgggcacgtacaccacctgcccggcctgccac
ggcaagcgctacaagccggagatccttgaggtgcagtggaacggccgcagcatcgcggac
attttggcgctgaccgtggacgaggcactggaggtcttcgccgaggagccgaaggtgctg
cgctctgtcgaattcttgcacgcgctcggcctgggctatctgcggctggggcaggggtcc
ccggagctttcgggcggggaggcgcagcgcatcaagctggcctccgaaatgcagcgcggt
tctagccgcaagcacagcctgtacctcctggacgagccaacgacaggcctacacccggcg
gatgttgatctgttgctcgcccagctgcgccgccttgtcgacgacggcgccacagtggtc
gtcgtcgagcacgacctgcgggtggtcgcgcaggccgaccacattatcgacgtcggccca
ggcgccggggacgagggcggccagatcttggccaccgggacgccggcggcagtcgcccag
caggggacagatccggattcgcgctcggtgacggcgcaggtgctggccgaacgggctggg
ttgcgctga
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