Corynebacterium sp. NML98-0116: BJP05_09765
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Entry
BJP05_09765 CDS
T10271
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
corn Corynebacterium sp. NML98-0116
Brite
KEGG Orthology (KO) [BR:
corn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
corn03032
]
BJP05_09765
03400 DNA repair and recombination proteins [BR:
corn03400
]
BJP05_09765
Enzymes [BR:
corn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BJP05_09765
DNA replication proteins [BR:
corn03032
]
Prokaryotic type
DNA Topoisomerases
BJP05_09765
DNA repair and recombination proteins [BR:
corn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BJP05_09765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AOX06396
LinkDB
All DBs
Position
complement(2115564..2118416)
Genome browser
AA seq
950 aa
AA seq
DB search
MAEDGKTLVIVESATKAKKIQKYLGSDYIVEASVGHIRDLPGRAADIPAKYKKEPWAKLG
VNPESGFAPIYVVSPDKKKKVTDLKAKLKQADRLLLATDPDREGEAIAWHLLETLKPKVP
VERMVFNEITESAIREAAENTRELDMDLVDAQETRRILDRLYGYEVSPVLWKKVMPRLSA
GRVQSVATRVIVERERERMAFIPAEYWDVTATYGGGTAFDAKLVAINGSRIAQGKDFDDR
GRLKGSAEGIVVVDKQVAEELAGALKGTSMTVSSVEDKPYSRKPYAPFMTSTLQQEAGRK
LRFTSARTMRIAQRLYENGHITYMRTDSTSLSQQGLSAARAAATELYGAEYVADKPRIYD
RKVKNSQEAHEAIRPAGERFATPGQLSKVLDAEEFKLYELIWQRTVASQMENARGNSTKV
TVAGDFDTEFAATGRTITFPGWLRAYSDTRDSETHLPQLTAGDELPTTAISADGHSTNPP
ARYTEASLVKKMEDLGIGRPSTYASIIKTIQDRGYVFSRGNALVPSWVAFSVVGLLENNF
DALVDYDFTSSMEDELDEIAHGNEDRTRWLTSFYFGDADASDNTAEAIARRGGLKHIIED
NLERIDARQVNSLKLFDDAEGRAVNVRVGRYGPYMERQVGVTAEGEPEYQRANIPEATTP
DEVTLELAEKLFATPQSGRELGVNPANGRTVVAKEGRFGPYVTEQLGDDELEKAQAHAEE
IIAEERAAEDKQRAEEGKRKKNWDTKTAAKQKEKRMTELVDEQLKPATASLFQSMDPASV
TLEQALQLLSLPREVGVDDGEVITAQNGRYGPYLKKGSDSRSLASEEQIFSITLDEARRI
YAEPKRRGRGAAKAPLKLLGDNDVSGKPMSIKDGRFGPYVTDGTTNASLQRGDTPETMTD
ERANELLSARRAREAENPKPAKKAARKTTRKKATKKTTRKKATKKAAKRS
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaagacggcaagaccctcgtcatcgtggagtccgcgacgaaggcgaagaagatc
cagaagtatctgggaagtgactacattgtggaagcttccgtggggcacattcgtgatctt
ccgggccgtgctgctgacatccctgcgaagtacaagaaggaaccgtgggcgaagttgggt
gtgaatccggagtctgggtttgcacctatatatgttgtcagtcctgacaagaagaagaag
gtcaccgacctgaaggcgaagttgaagcaggcggacaggctgctgctggcgacagacccg
gaccgtgagggtgaggcgatcgcgtggcacttgcttgagacgttgaagccgaaggtgccg
gtggagcgcatggtgttcaacgagattacggagtcggcgattcgggaggctgcggagaat
acccgtgagctggatatggatcttgtcgacgcccaggagacccgtcgcatcctggaccgg
ttgtatggctacgaggtctctccggtgttgtggaagaaggtcatgccgaggttgtcggcg
ggtcgtgtgcagtcggtggcgacgcgcgtgattgtggagcgtgagcgtgagcgcatggcg
tttatcccggcggagtactgggatgtgaccgcgacgtacggcgggggcaccgcgtttgat
gcgaagcttgtagcgattaacggttcgcggattgcgcaggggaaggactttgatgatcgc
ggtcggctgaaggggtcggctgaggggattgtggtcgtcgataagcaggtggcggaggag
cttgctggggcgctgaagggcacctcgatgacggtgagcagcgtggaggacaagccgtac
agccgcaagccgtacgcaccctttatgacgtccactctgcagcaggaggccgggcggaag
ttgcgctttacgtcggcccgtacgatgcgtattgcgcagcgcctgtacgagaacggccac
attacgtatatgcgtacggactcgacgtcgctgtcccagcagggcttgtcggcggcgcga
gctgcggcgacggagctgtacggcgcggagtacgtggcggacaagccgcgtatctacgac
cggaaggtgaaaaactcgcaggaagcgcacgaggcgatccgccctgctggtgagcgtttt
gctacgccggggcagctgtcgaaggtgctggacgcagaggagttcaagctctatgagctg
atttggcagcgcacggtggcctcccagatggagaacgcccgcgggaactcgacgaaggtg
acggtcgcgggcgacttcgataccgagtttgctgcgaccggccgcacgattacgttcccg
ggttggctgcgcgcctactcggacacccgcgacagtgagacgcacttgccgcagctcacc
gctggcgacgaactgccgaccaccgcgatttcggcggatggacactccacgaacccgccg
gcgcgctacacggaggcgagcctggtgaagaagatggaggacttggggattgggcgtccg
tcgacgtatgcgtcgattattaagacgatccaggaccgcggctacgtcttctcccgcggc
aacgcgctggtgcctagctgggtggcgttttctgtggttgggctgttggagaacaacttc
gacgccctggtggactacgacttcacgtcctcgatggaagacgagcttgatgagatcgcg
cacggcaacgaggaccgcacccgctggctgactagcttctacttcggcgacgccgacgcc
agcgacaacaccgctgaggcgattgcgcgtcgcggtggtctcaagcacatcattgaggac
aacctcgagcgtatcgacgcccgccaggtcaactcgctgaaactcttcgacgacgcggag
ggccgcgccgtcaacgtgcgcgtgggccgctacgggccgtacatggaacgccaggtgggt
gtcaccgccgagggcgagccggagtaccagcgcgccaacatcccggaggcgaccacgcct
gatgaggtcaccctggagctggcggagaaactgttcgccaccccgcagtcgggccgtgag
ctgggcgtgaacccggccaacgggcgcacggtggtggccaaggagggccgcttcggcccg
tacgtcacggagcagctcggcgacgacgagctggagaaggcgcaagcccacgccgaggaa
atcatcgccgaggagcgtgccgccgaggacaagcagcgcgctgaagaaggcaagcggaag
aagaactgggacaccaagactgccgcgaagcagaaagaaaagcgcatgaccgagctcgtc
gacgagcagctcaagcccgcgacggcgtctctgttccagtcgatggacccggcctctgtc
acgcttgagcaggcgctgcagctgctgagcctgccgcgcgaggtgggcgtcgacgatggg
gaagtgatcacggcgcagaacggccgctacggcccgtacctgaagaagggttccgactcg
cgctccctggccagcgaggagcaaatcttcagcatcacgctggacgaggcacgccgcatc
tacgcggagccgaagcgccgcgggcgcggggcggcgaaggcgccgctgaagctgctcggc
gacaacgacgtgtccggcaagccgatgtccattaaggacggccgcttcggaccgtacgtc
accgacggcactaccaacgcgtccctccagcgtggcgataccccggagaccatgacggac
gagcgcgcgaacgagctgctgtccgcgcgccgggcccgcgaggcggagaacccgaagcca
gccaagaaggccgcgcgcaagaccacgcggaagaaggcaacgaagaagacgacgcgcaag
aaggcgacgaagaaggccgcgaagcgctcgtaa
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