Corynebacterium sp. NML98-0116: BJP05_10030
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Entry
BJP05_10030 CDS
T10271
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
corn Corynebacterium sp. NML98-0116
Pathway
corn03030
DNA replication
corn03430
Mismatch repair
corn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
corn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BJP05_10030
03430 Mismatch repair
BJP05_10030
03440 Homologous recombination
BJP05_10030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
corn03032
]
BJP05_10030
03400 DNA repair and recombination proteins [BR:
corn03400
]
BJP05_10030
Enzymes [BR:
corn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BJP05_10030
DNA replication proteins [BR:
corn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BJP05_10030
DNA repair and recombination proteins [BR:
corn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BJP05_10030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_16
DnaX_C
AAA_30
AAA_19
AAA_14
Rad17
AAA_18
AAA_28
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AOX06441
LinkDB
All DBs
Position
complement(2173024..2175042)
Genome browser
AA seq
672 aa
AA seq
DB search
MALYRKYRPATFGELVGQDQVTVPLSNALDNGRISHAYLFSGPRGCGKTSSARILARSLN
CVEGPTSTPCGKCASCVSLAPGGTGNLDVMELDAASHGGVDDMRELRERAMFAPAESRYR
VFIIDEAHMISPSGNNALLKIVEEPPEHLIFIFATTEPEKILGTIRSRTHNYPFRLLTPQ
AMRHLLENIVAEEGAHVDENVYPLVIRAGGGSPRDTLSVLDQLLAGAGPDGLTYEMALPL
LGVTDLTLLDAAVDALATKDAAAMFHTIDKVIESGHEPRRFALDLLDRLRDLLLIVTVPD
AFGEGLVDAPVDRAEILRAEAQQFHPSTLAALATEVNDRIGDLRGATSPRLLLEVMMAHL
LTMGDRPAVSSATSAAPAPAAPAQAAQPAQPAPSQAPSQGGGAAAAAAAAARIAERRKAQ
SAPKPEPKPEPAAKPEPKPEPKPEPKPVPQPPAEPATPPKPEPTPAPKPEPAPAEDLLER
VQRDWMKLRQAVGKRNQVAEIMLAEAKPLSLDNEDGQPTLLIGHNTGALAERLNADNNNG
DIVAVFSEALGTKVAVRCVVGTKGAKGASKSEATPKPTAQQPTDWRAIAKAAGQRSAQQE
RREREEVPPPPEPFHEDAGWEPPPPPPEPYSQEDEERDMVDQAEAESATFDRRDATEVAM
DLLASELGAKPL
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
gtggctctgtaccggaaatatcgtcctgcaacgtttggtgagctggttgggcaagaccag
gtgactgtgccgttatcgaacgctctcgacaacgggcgcatcagccatgcgtacctgttt
tctgggccgcgggggtgcggcaagacgtcctctgcgcgcattctggcgcgctcgttgaac
tgcgttgaggggccgacatccactccgtgtggcaagtgcgcgtcctgcgtgtcgctggcg
ccgggtggcaccgggaacctggacgtgatggagctcgacgccgcctcccacggcggcgtc
gacgacatgcgtgagctgcgcgaacgcgccatgttcgcgcctgcggagtcccgctaccgc
gtcttcatcatcgacgaggcgcacatgatttcgccctccggcaacaacgccctgctcaag
attgtggaggagccgccagagcacctcatcttcatctttgcgacgaccgagccggaaaag
attcttggcacgatccgttcgcgtacccacaattacccgttccgcctgctgaccccgcag
gcgatgcgccacctgttggaaaacattgtggcggaggagggggcgcacgtcgatgagaac
gtgtacccgctggtcatccgcgctggaggcgggtcgccgcgcgacacgctgtcggtgttg
gaccagctgctggcgggcgccggcccggacggcctgacctacgagatggcgctgccgctg
ctcggggtcacggacctcacgcttctcgacgccgccgtcgacgccctcgccaccaaggac
gccgcggcgatgttccacaccatcgacaaggtgatcgagtccggccacgagccgcgccgt
ttcgccctcgacctgctggaccggctgcgtgacctgctgctcatcgtcaccgtgccggat
gccttcggcgaagggcttgtcgacgcccccgtcgaccgcgccgaaatcctccgcgccgaa
gcgcaacagttccacccgtcgacgctggccgcgctcgcgaccgaggtcaacgatcggatc
ggcgacctccgcggcgcgacgtccccgcgcctgttgttggaagtgatgatggcgcacctg
ctcacgatgggcgaccgcccggcggtttcctcggctacctcagctgcaccggcgcctgct
gcccctgcgcaggcggcccagcctgcccagccggccccgtcgcaggctccttcgcagggt
gggggagccgcggccgctgcggctgctgcggccaggatcgcggagcgccgaaaggcgcag
agcgcgccaaagcctgagcccaaacccgagcctgcagcgaagcctgagcccaagcccgag
ccgaagcctgaaccgaagccggtgccgcaaccacccgcggaacccgcaacgccgccgaag
ccggaaccaaccccggcaccgaagccagagccagcacctgcggaagacctcctcgaacgc
gtgcagcgtgactggatgaagctgcgccaagctgtgggcaagcgcaaccaggtcgccgaa
atcatgcttgccgaagccaaaccgctctccctcgacaacgaagacggccagcccacactg
ctcatcggacacaacacgggtgccctcgcggagcgcctcaacgccgacaacaacaacggg
gacatcgtcgcggtgttctccgaagcgcttggcaccaaggttgccgtgcgttgcgtggtg
ggcacgaaaggggcgaagggggcgtcgaaaagtgaagcaaccccaaaacccacagcacag
cagcccactgactggcgggcgatagcgaaggccgccgggcagcgcagcgcgcaacaggag
cgccgcgagcgcgaggaagtcccaccgccgcccgaaccattccacgaagacgccggatgg
gagccgcctccgccgccgcccgagccctacagccaagaggatgaagagcgcgacatggtc
gaccaggccgaggccgagtcggcgaccttcgaccgtcgtgacgccaccgaagtcgccatg
gacctgcttgccagcgaacttggagccaagcccttgtaa
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