Corynebacterium sp. SCR221107: PAB09_04350
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Entry
PAB09_04350 CDS
T11128
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cors Corynebacterium sp. SCR221107
Pathway
cors03420
Nucleotide excision repair
cors03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cors00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PAB09_04350
03430 Mismatch repair
PAB09_04350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cors03400
]
PAB09_04350
Enzymes [BR:
cors01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PAB09_04350
DNA repair and recombination proteins [BR:
cors03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PAB09_04350
MMR (mismatch excision repair)
Other MMR factors
PAB09_04350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
DEAD
CarD_TRCF_RID
ResIII
Motif
Other DBs
NCBI-ProteinID:
WBT09996
LinkDB
All DBs
Position
962217..964607
Genome browser
AA seq
796 aa
AA seq
DB search
MQSAPIQDLIEGLNPQQLQAVEHSGSPLLIVAGAGSGKTAVLTRRIAYLLRMRGVHPGQI
LAITFTNKAAAEMRERVAELVGPIANRMWVATFHSTCVRILREQAGLVPGLNTNFTIYDS
DDSRRLLSMIAKDMMLDAKQFTARSLANGISNLKNELIDPAEALAEAEQTHNPYESTIAK
VYAEYQRRLRGANAVDFDDLIGETVRIFKQHPQVTEYYRRRFRHVLIDEYQDTNHAQYVL
IHELVGQGPQASELCVVGDSDQSIYAFRGATIRNIEEFERDYPQATTILLEQNYRSTQTI
LDAANAVIARNANRREKKLWTAAGVGDKIVGYVADNEHDEARFIATEIDNLSDRGVNYAD
IAVMYRTNNSSRAVEDVFIRTGIPYKVVGGTRFYERKEIRDIIAYLRLLDNPEDEVSLRR
IINTPRRGIGDKAIAFLNLHAENSGVSFNQALIDGAANKVSMLGTRGVKAVGGFMELLDG
LRSAAAESKNEVTGMPDLGAMVTHILDMTGYKAELEQSSDPQDGARLDNLNELVSVAREF
SSEAANQMAYLTMDGQDLSDVLDEGEAVPGSLQAFLERVSLVADADQIPDDDQGVVTLMT
LHTAKGLEFPYVFLTGWEDGQFPHMRALGDPKELAEERRLAYVGITRARKRLYLSRAMLR
SSWGNPQTNPPSRFLNEVPDELIDWRRQEPTSSFNDAWSGGSYGGSSAGSFGEGRGYYGG
GSPSASSQRRIPKAAPRSAKSELHLEVGDRVNHEKYGLGTVKKMDMVGAHASATIDFGSS
GTVRLMLIGGVPMEKL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctgcgcccatccaggatctcatcgaggggcttaacccgcagcagctgcaagca
gtagagcacagtggctcaccattgctgatcgtggccggtgctggttctggcaagaccgcg
gtccttactcggcgcatcgcctacctgttgcgcatgcgcggggtgcaccctgggcagatc
ttagccattacctttaccaacaaagctgcggcggagatgcgggaacgcgttgctgaactg
gtcggacccatcgctaaccgcatgtgggtggcaacctttcactccacctgcgttcgaatc
ctgcgcgaacaggcaggtttggttccgggactcaacaccaacttcaccatctatgactcg
gatgactcccggcgcctgttgtcgatgatcgccaaggacatgatgctcgatgccaagcaa
tttactgctcgttcgctggctaatggcatttccaacctcaaaaatgagctaatcgatccg
gcggaggcactggcggaggcagaacagacccataacccctatgaatccacaatcgccaag
gtctatgcggaatatcaacggcgtctgcgcggcgctaacgcggtggacttcgatgatctc
atcggcgagacggttcgcattttcaagcaacatcctcaggtcacggagtattatcgcagg
cgttttcggcatgtgcttatcgacgagtaccaggacaccaaccacgcgcagtacgtgctt
atccatgaactcgtgggccaaggtccgcaggcctcagaactgtgcgtagtgggcgattca
gaccagtcgatttacgcgttccgtggtgcgacgatccgcaatattgaggagtttgagcgc
gactacccgcaggccacgacgatcctactggagcaaaactaccgctccactcaaacaatc
ctggatgcggccaatgccgtaatcgcacgcaacgccaatcgccgggaaaagaagctatgg
acggcagcgggagtaggcgacaagattgttggatatgttgctgataatgagcacgacgag
gcccgcttcatcgcaaccgagatcgacaacctcagtgaccgtggcgtaaattatgccgat
attgcggtcatgtaccgcaccaataactcctcccgtgcggtagaagacgtgtttatccgc
accggaattccctacaaggtggtaggtggcacccggttctacgagcgcaaagaaatccgc
gatatcatcgcctacctgcgcctgcttgacaatcccgaggatgaagtttccttgcgcagg
attatcaacactccgcgccgtggcatcggggacaaggcaatagccttcctcaatctccac
gccgaaaactctggtgtcagtttcaaccaggctctcatcgacggtgccgccaacaaagtc
tccatgctcgggactaggggagtaaaggccgtgggtggattcatggagctgctcgacggg
ctgcgttcggctgccgcggagtcgaaaaatgaggtgaccggcatgcccgatcttggggcg
atggtcactcacatcctcgacatgaccggatacaaggccgaactcgagcagtccagcgat
ccgcaagacggggcacggctcgataacctcaacgagttggtgtcagtcgcgcgagagttt
agctccgaggctgccaaccaaatggcatacctcaccatggatggccaagacctttccgat
gtactcgacgagggcgaggctgtgcccggtagtctgcaggcattcttggaaagagtctcg
cttgttgcagacgcagaccaaatcccggatgacgaccaaggggtggtcaccctcatgacg
ttgcacaccgccaagggcttggaatttccctacgtgtttctcaccgggtgggaggacgga
caattcccgcatatgcgcgccttgggtgatcccaaggagcttgccgaagaacgccgtttg
gcgtatgtgggaatcacccgcgcccgcaagcgtttgtacctcagccgtgcaatgctgcgc
agctcctggggcaacccgcagacaaatccgccctcccgctttctcaacgaagtcccagat
gagctcatcgattggcgaaggcaagagccgaccagctcctttaacgatgcgtggagtggc
ggctcctacggcgggtcttctgccggttccttcggcgaggggaggggatactatggcggc
ggttcaccgagcgcaagctcgcaacgaaggatccccaaggcggccccccgcagcgcgaag
agcgagttgcatctcgaggtcggtgaccgcgtcaaccacgaaaagtacggccttggcacg
gtaaagaagatggacatggtcggcgctcacgcttctgccaccatcgatttcggctcctcg
ggcaccgtgcgcctgatgctcatcggcggggtgcccatggagaagctttag
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