Corynebacterium sp. SCR221107: PAB09_08160
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Entry
PAB09_08160 CDS
T11128
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cors Corynebacterium sp. SCR221107
Pathway
cors03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cors00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PAB09_08160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cors03019
]
PAB09_08160
03016 Transfer RNA biogenesis [BR:
cors03016
]
PAB09_08160
Enzymes [BR:
cors01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PAB09_08160
Messenger RNA biogenesis [BR:
cors03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PAB09_08160
Transfer RNA biogenesis [BR:
cors03016
]
Prokaryotic type
tRNA degradation factors
PAB09_08160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
KH_2
DUF4852
Methyltransf_7
RNase_PH_C
Coatomer_g_Cpla
KH_PNO1_2nd
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
WBT07883
LinkDB
All DBs
Position
complement(1889148..1891409)
Genome browser
AA seq
753 aa
AA seq
DB search
MSNTKGQIQFSEDPDYGVTEAIVTIDNGDFGTRTIRFETGQLARQADGSVTTYLDDDTML
LATTTASKQPREGFDFFPLTVDVEERMYAAGQIPGSFFRREGRPSTEAILACRLIDRPLR
PTFVKGLRNEVQVVVTVLSMNPTDRYDVVAINGASAATQLSGLPTSGAVGGVRIALISDE
AHPEGQWVAFPTEEQHQAALFELVVAGRIVAKKKGNKTIEDVAIMMVEAGATEHVVERIA
GGAPAPTETVVAAGLEAAKPFIELLCRAQAGLAERAAKETQEFPLFPAYTDEVYAAVEKK
ASAKLTKLLTIKAKQERDEATNEYMVQVEDELIDSFEDNENASKEIRAAYNAVMKKIVRQ
KILTEQFRIDGRGVTDIRDLSVEVDLIPRAHGSSLFERGETQILGVTTLNMLKMEQQIDS
LTPTTSKRYIHHYNFPPYSTGETGRVGSPKRREIGHGALAERALVPVIPSREEFPYTIRQ
VSEALGSNGSTSMGSVCASTLSLYNAGVPLKAPVAGIAMGLVSDEVDGETRYVALTDILG
AEDAFGDMDFKVAGTSEFVTALQLDTKLDGIPSEVLAAALAQARDARITILDTMAEVIDT
PDEMSPLAPRITTVTVPVSKIGEVIGPKGKTINQITEETGADISIEEDGTVYVSATSGEA
AQAAIEKINSIANPQLPKVGERFLGTVVKTTAFGAFVSLVPGRDGLVHISKLGNGKRVEK
VEDVVNVGDKIEVEILDIDNRGKISLGLVSNED
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaacaccaagggacagattcagttctctgaagatcctgattatggagtaaccgag
gccatcgtaaccatcgataatggcgatttcggaactcgcaccatccgttttgagactggg
caattggcccgccaagcggacggttccgtcaccacctacctggatgatgacaccatgctg
ctcgccaccaccacggcctcaaagcagccccgtgaaggcttcgacttcttcccgctaacc
gtggacgtcgaggagcggatgtacgccgcaggccaaattcccggctccttcttccgccgt
gagggccgtccctccaccgaggccattctggcgtgtcgtctgatcgaccgcccgctgcgc
cccaccttcgtcaagggcctgcgcaacgaggtgcaggtcgtggtgacggttctttccatg
aaccccaccgaccgctacgacgtcgtcgccatcaatggcgcctccgccgccactcagctg
tccggcctgcccacctccggcgccgtcggcggcgtacgcatcgctctgatttctgatgag
gcgcacccagaagggcagtgggttgccttccctaccgaggagcagcaccaggccgccttg
ttcgagctcgtggtcgcaggacgcatcgttgccaagaagaagggcaacaagaccatcgaa
gacgttgccatcatgatggtcgaggccggtgccaccgagcatgtggtcgagcgcatcgct
ggcggagcccctgcgccgacggagaccgtggtcgccgcaggcctagaggcagcaaagccc
ttcatcgagctgctgtgccgcgctcaggctggtctggctgagcgtgcagcgaaggagacc
caggagttcccgctgttcccggcctacactgacgaggtctacgctgcggtggagaagaag
gcttcggccaagctcaccaagctcttgacgatcaaggccaagcaggagcgcgacgaggcc
accaacgagtacatggtgcaggtcgaggacgagctcatcgattccttcgaggacaatgag
aacgcctccaaggaaatccgcgccgcctacaacgcggtgatgaagaagatcgtgcgccag
aagatcctcaccgagcagttccgcatcgacggccgcggtgttaccgacatccgcgacctt
tccgtcgaggttgacctcatccctcgtgcgcacggttcctccctcttcgagcgcggtgag
acccaaatcctcggcgtgaccaccttgaacatgctcaagatggagcagcagattgactcg
ctgaccccgaccacctccaagcgctacatccaccattacaacttcccgccgtattccacc
ggcgagaccggccgtgtgggttccccgaagcgccgcgagatcgggcacggcgcgctcgcc
gagcgcgcgctcgtgccggtgattccttcccgcgaggagttcccgtacaccatccgccag
gtctctgaggctttgggctcaaacggctcgacgtctatgggctcggtgtgtgcctcgacc
ctctcgctgtacaacgccggcgtgccgctgaaggccccggtggccggcatcgccatgggc
ttggtctccgatgaggtcgacggcgagacccgctatgttgcgctgaccgacatcctcggc
gccgaggatgccttcggcgacatggacttcaaggtggccggtacgtctgagtttgtgacc
gcactgcagctggacacgaagctcgacggtattccttccgaggtgctcgccgccgcactg
gcacaagctcgtgatgcccgcatcaccatcttggacacgatggccgaggtcatcgacacc
ccggacgagatgagcccgttggctcctcgtatcaccacggtcaccgtcccggtttccaag
atcggtgaggtcatcggcccgaagggcaagaccatcaaccaaatcaccgaggagaccggt
gcggacatctccatcgaggaggatggcaccgtctacgtctctgccaccagcggcgaggca
gcccaggccgcaatcgagaagatcaattcgattgccaatcctcagctgccgaaggtcggt
gagcgattcctcggcactgttgtcaagaccaccgccttcggcgcgttcgtgtcgctggtt
cccggccgcgatggattggtccacatctccaagctgggcaacggcaagcgagtggagaag
gtcgaagacgttgtcaacgtcggcgacaagattgaggtcgaaatcctcgacatcgacaac
cgaggcaagatctccctcggactggtcagcaacgaggactag
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