Corynebacterium sp. sy039: FQV43_02605
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Entry
FQV43_02605 CDS
T07955
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
cory
Corynebacterium sp. sy039
Pathway
cory03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cory00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FQV43_02605
09124 Replication and repair
03420 Nucleotide excision repair
FQV43_02605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cory03021
]
FQV43_02605
03400 DNA repair and recombination proteins [BR:
cory03400
]
FQV43_02605
Enzymes [BR:
cory01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FQV43_02605
Transcription machinery [BR:
cory03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FQV43_02605
DNA repair and recombination proteins [BR:
cory03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FQV43_02605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QDZ42181
UniProt:
A0A5B8NUM9
LinkDB
All DBs
Position
complement(588742..590421)
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AA seq
559 aa
AA seq
DB search
MPSGAFDAGPLIVQSDKTVLLEINHPQAEQARLALAPFAELERAPEHIHTYRITPLALWN
ARAAGHDAEQVVDLLERYSRFPVPQSLLIDVAETMARYGKVRLLRHPAHGLILESDTADI
VVQLQRDKNIAPMLGATIDELTLVVHPSERGRLKQELLKIGLPAEDLAGYIDGESHPLAL
STDAEPWQLRDYQRMAADSFWEGGSGVVVLPCGAGKTLVGASVMAKAQATTLILVTNTVS
GRQWRDELLKRTTLTPEEIGEFSGEKKEIRPITIATYQVVTRKTKGEYRNLELFDSRDWG
LIIYDEVHLLPAPIFRLTSDLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDLE
QQGYIATAQCFEVRSTMDKDERMVYATASAKDRYRVAACAHTKLAALRTIVAHHHEQPTL
IIGGFVEQLEEIAAALDVPLLDGRTPNKKREQLFDAFRKGEITTLVVSKVANFSIDLPEA
AVAIQVSGTFGSRQEEAQRLGRLLRPKADRREAYFYSLVSRDSVDADFAIHRQRFLAEQG
YAYRIVDATDLTTILPPIQ
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
gtgccatctggtgcatttgatgctggacccttaattgtccaatcggataaaactgttctg
ctcgaaatcaaccacccacaagccgagcaagcacgtcttgcgttagctccttttgcggaa
ctcgaacgtgcaccagaacatatccatacttaccgtattactcccctggcactgtggaat
gcccgtgcagccggtcatgatgctgaacaagtagtggatctgttggaacgctattctcgt
ttcccagtgccacaatctttactcattgatgtggctgaaaccatggcgcgctacggcaaa
gtgcgactattgcgtcatcctgcgcatgggctgattttagagtctgatactgccgacatt
gtggtgcaattgcaaagagataaaaatatcgcccccatgttaggagccactattgatgag
ctaaccctagttgttcatccttcggaacgcggtcggctcaaacaggagttactcaaaatt
gggttgcctgctgaagacttagcaggatatatcgatggcgaatctcaccctcttgccttg
agcactgacgctgaaccgtggcagttgcgcgattatcagcgtatggctgccgattccttt
tgggaaggtggctcaggagtcgtggtcttgccatgtggtgctggtaaaactttggttggg
gccagtgtgatggcaaaagctcaggctaccacgttaattctggttacgaacaccgtttcc
gggcgccaatggcgtgatgagttgctcaaacgtaccacgctcaccccagaagaaattggt
gagttttctggtgagaaaaaagaaattcgtcccatcaccattgcaacctaccaagtagtt
acccgaaaaaccaaaggtgaataccgtaatttagagttatttgattcaagagactgggga
ttaattatctatgatgaggttcatttactccctgcccctatttttcgactcacctcagat
ttgcaatcccgacgccgcctcggacttactgctactttagtcagagaagacggcagagaa
ggcgatgtgttctcacttattggccccaaacgctatgatgcgccgtggaaagatcttgag
caacaaggctatattgccaccgcgcaatgctttgaggtgcgctcaactatggataaagac
gagcgcatggtctatgccactgccagtgctaaggatcggtatcgggttgctgcctgcgcg
catacaaaactagctgcattgcgcactattgtggctcatcaccatgagcaaccaacactc
atcattggtggctttgtggaacagctagaagaaatagcggcagctcttgacgtacctttg
cttgatggcaggacaccaaataaaaaacgagaacagctattcgacgcttttcgcaaaggc
gaaattaccacattggttgtttctaaagttgctaacttttctatcgatcttcctgaagcc
gcagtcgctattcaagtctctggtacttttggttcacgccaagaagaagcacaacgcctt
ggtagactattgcggcctaaggcggatcgtcgggaagcatatttttattctcttgtcagt
cgcgatagtgtcgatgcagacttcgctatccacaggcaacgctttttagctgaacaaggc
tatgcgtaccgcatcgttgatgctaccgacctaactacgattttgccccctattcaatga
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