Corynebacterium sp. sy039: FQV43_02870
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Entry
FQV43_02870 CDS
T07955
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cory
Corynebacterium sp. sy039
Pathway
cory03420
Nucleotide excision repair
cory03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cory00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FQV43_02870 (pcrA)
03430 Mismatch repair
FQV43_02870 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cory03400
]
FQV43_02870 (pcrA)
Enzymes [BR:
cory01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FQV43_02870 (pcrA)
DNA repair and recombination proteins [BR:
cory03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FQV43_02870 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
FQV43_02870 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QDZ42226
UniProt:
A0A5B8NSZ7
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All DBs
Position
641081..643513
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AA seq
810 aa
AA seq
DB search
MNEYVNNNPFQARTTDHTHQGLPTQGLASSAEELLDGLNEQQKQAVTYHGGALLIVAGAG
SGKTAVLTRRIAYLMHTGVAHPGQILAITFTNKAAAEMKERVESLVGPIAQRMWVATFHS
TCVRILREQAGLIPQLNSNFTIYDSDDSKRLLGMIAKDLDIDVKKYPPRMLAAGISKYKN
DLISVAQAQAEVTTGAGSYEAMVVQVYEQYQRRLADANAVDFDDLIAITVSILQNNPDVA
AYYRRRFRHVLVDEYQDTNHAQYVLLRTLVGEGEQASHLCVVGDSDQSIYAFRGATIRNI
EEFERDFPSAQTIVLEQNYRSTQNILSAANAVIARNSQRRKKNLWTEAGSGEKIIGYVAD
NEHDEARFIATEIDHLSDHGTNYNDIAIMYRTNNSSRAIEEIFIRSGIPYKVVGGTRFYE
RKEIRDIVAYLRLIDNPEDEVSLRRIINTPRRGIGDKALALLSLHAQNNRISLYQALLDA
CADKVSLLGTRAVRAISGFVELLTGIQQRATENLHELTQLPDIAAMVSDILDSTGYKSEL
EQSNDPQDAARLDNLNELVSVAREFCAEAANQLAYVEQESIADISEAQAVPGSLQAFLEK
VSLVADSDQLPDEQQDVVTLMTLHTAKGLEFPIVFLIGWEDGQFPHMRALGDPKELAEER
RLAYVGITRARRKLYLSRAIMRSSWGNAQMNPQSRFLDEIPGDLLEWRRTEPDGMRSGWY
ESYGQPNTPRTQNTYGSYGNMRSHRPNTARTTKTSQLHVVVGDRVNHEKYGLGTVTAVDG
MGQYMSATIDFGSSGVVRLMLIGNVPMEKL
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaatacgtaaacaataatccttttcaggcaagaactactgaccatacacatcag
ggcttacccactcagggcttagcaagttctgctgaggagcttctcgacgggctcaatgaa
cagcagaagcaagcggtgacatatcacggtggagctttgcttatcgtcgcaggtgctggt
tccgggaaaacagctgtgcttacgaggcggattgcctatttaatgcatacaggagtggca
catccaggtcagattcttgctattaccttcactaataaggctgctgcggagatgaaggaa
cgcgtagagtctcttgttggaccgatcgctcaacgtatgtgggtggctaccttccattca
acgtgtgtgcgtattcttagggagcaagcaggactgattccacagctaaacagtaatttt
actatctatgattctgatgattccaagcgtctgctgggaatgattgccaaagatcttgac
atagatgtcaaaaagtatccgcctcgaatgcttgcagcgggaatatccaagtataaaaat
gatctcatcagtgttgctcaagcacaggcagaagtaacgacaggtgcgggttcttatgaa
gccatggtggtgcaagtatatgagcagtatcaacgtcgtttagctgatgctaatgctgta
gattttgatgatctcattgccataactgtgtcaattctgcagaataatccagatgtggct
gcatactaccgacgtcgtttccgccatgttttagtagacgaatatcaagatacaaatcat
gctcagtatgtcctattgcgtaccttggtaggggaaggggaacaggcaagccatctgtgt
gtcgttggtgattctgatcagtctatttatgcctttcgtggcgctacgatccgtaatatc
gaagaattcgagcgggatttccctagtgctcagactattgtgttggaacagaattatcgt
tccacccaaaatatccttagcgctgcaaatgcagtgattgcgagaaatagtcagcgtaga
aagaaaaatctttggactgaggcaggatctggtgagaagatcattggctatgttgccgat
aatgaacatgatgaggcacgtttcatagccactgaaatagatcacttgtctgatcacggc
acaaattataatgacatagcgatcatgtatcgtacgaataattcttcacgtgcaattgaa
gagatatttattcgttctggtattccttataaggttgttggtgggactcgcttttatgag
cgtaaagaaattcgggatatagttgcctatctgcgcctcattgataatcccgaagatgaa
gtatcactgcgtagaattatcaatactccacgacgcggcatcggtgataaagcccttgct
ttactgagccttcatgcgcagaataatcgcatcagtctttatcaggctctgctggatgcc
tgcgctgataaagtctcattgctaggtactcgtgcggttcgggcaataagtggttttgtg
gaattactcactgggatacagcaacgagctacagagaatctacatgaacttacacagctt
cctgatatcgctgctatggtttccgatattctcgacagtaccggctataagagcgaacta
gagcaatcgaatgatccacaagatgcagctcgtctagataatctcaacgaacttgtgtct
gttgcaagagagttttgtgcagaagctgctaatcaattggcatatgttgagcaggaaagt
attgcagatatatctgaggctcaggctgttcctggcagtttgcaggcatttctagagaaa
gtgtcattggttgctgatagcgatcaacttcctgatgagcaacaagatgttgtgacacta
atgactctgcacacagctaaaggtctggagtttccgattgtctttttaataggttgggaa
gacggacaattcccgcatatgcgtgccttaggggatccaaaagaactggcagaggagcgt
cgtttagcttatgtaggtataacacgtgcgcgtcggaagttatatctgtctcgtgcgatt
atgcgtagttcttggggaaatgctcaaatgaatccgcaatctcgtttccttgatgagata
cctggtgatcttttagagtggcgtagaacagaaccagacggaatgcgtagtggttggtat
gagtcatatggtcaaccaaacacgccacgaacgcagaatacgtatgggtcgtatggaaat
atgagatcgcatagaccgaatactgcgcgcactactaaaacaagccagttgcatgtggtg
gtgggagatcgcgttaatcatgagaaatacgggttgggcacggtgactgccgttgatggt
atggggcagtatatgtcagcaacaattgattttggttcctcaggagtggtgcgtctcatg
ctcattggtaatgtgccaatggaaaaactctga
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