KEGG   Corynebacterium sp. sy039: FQV43_04345
Entry
FQV43_04345       CDS       T07955                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
cory  Corynebacterium sp. sy039
Brite
KEGG Orthology (KO) [BR:cory00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cory02048]
    FQV43_04345
Enzymes [BR:cory01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     FQV43_04345
Prokaryotic defense system [BR:cory02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   FQV43_04345
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII T1RH-like_C DEAD AAA_22 MetJ
Other DBs
NCBI-ProteinID: QDZ42477
UniProt: A0A5B8NU28
LinkDB
Position
complement(954437..957526)
AA seq 1029 aa
MNKVGQKEIVTQGKVINLLTQNLGYEYLGDWRDRDNSNILESLLQQNLESRGYETTLIRR
AVQEFTKKASLPAGGSLYEVNRKIYELLRYGVKVQHSASETFETVQLIDWESPQANHFAV
AEEVTVKGQNTKRPDLVLYVNGIALGVIELKRSKVSVSEGIRQNIGNQGSQFIRSFFTTV
QLLFAGNDVEGLRYGVIEASEKYWLQWKETSEVQEPLDREILQMLEKTRFLEIIHDFIVF
DAGTKKTCRYHQYFAIKEAQPRIASREGGIIWHTQGSGKSLTMVWLAKWIRENQENARVL
IITDRTELDNQIELVFDGVNESIERASSAKNLLGLLNKSQPWLICSLVHKFRGDNETSTD
DTESFLQHLKKSRSEGFSPKGNLFVFVDEAHRTQSGKLHAAMKELLPEAMFIGFTGTPLL
KKDKAKSIETFGSYIHTYKFDEAVTDGVVLDLRYEARDIRQRLTGQQQIDKWFEARTKGM
TDLTKSRLKQRWATIREIESSEPRVRMIAQDIIMDMDSQPRLSDGRGNAILVCSSVYQAC
KFYEIFSKSPLTGKIAIITSYEPTAASISKEDSGLGQNEAMFKYEVYRKMLSDYFGVSQD
EAVKRIPEFEKEVKETFINHPGQMRLLIVVDKLLTGFDAPSATYLYIDKKMQDHSLFQAI
CRVNRLDGGDKDYGYIVDYRDLFQSINAAVDDYTSGAFDEYEKEDIEGLLKNRVEEERRD
LEEALEYVQALCEPVAPPRGTLQFQQYFCAKDSGNAQQLKDNELKRVDLYKGVSKLVRAF
ANIANKMAEAGYSTTEAQQIRKEVEFYSDVYDEVKLGAGDNEDIKQFEAGIRSLLDTYVS
AEPSRPLASFEQGLVSLIVDRGKDAIEMLPEGTKKDKRAVAETIVNNVRKTIVDEQAMNP
KYYEKMSSLLDELIEKRHQDSIGYEEYLEKLIELAQHVGKGSGEDSEYPNWANTQARQAF
IDFAWPEGIVLDLEDLYTAIQQNKEHDWPSSKPKRKALARTIHLNTSGKLETSVIENLLS
VIERHNEFQ
NT seq 3090 nt   +upstreamnt  +downstreamnt
atgaacaaagtagggcaaaaagaaattgttacccaaggaaaagtcattaaccttctaacg
caaaaccttggctatgagtatctcggtgattggcgtgaccgtgataattccaatatcctc
gaatcactactacagcaaaacctcgagtctcgtggttacgagaccactctgatccgtcgt
gctgttcaggagttcacgaaaaaagcttcactccccgctggcggatctctatacgaggtc
aatcgtaaaatctatgagcttttacgctatggagtcaaagttcagcattccgcatctgaa
acatttgaaaccgtacagctcattgactgggaaagtccacaggcaaaccactttgcagtt
gccgaagaagtaacagttaaaggtcagaacacaaaacgcccagacctcgttctctatgtc
aacggtatagctctgggggttattgaactcaagcgctccaaagtcagtgttagtgagggg
atccgccaaaatataggaaatcaaggttcacagttcatccgttctttcttcacaaccgtc
cagcttctttttgctggtaatgacgttgaaggcttacgctacggcgtcatagaagcatca
gaaaaatactggttacaatggaaagaaaccagtgaagtacaggaacctctcgaccgtgaa
atcctacagatgctggaaaaaaccagattcctagaaattattcacgatttcattgtcttt
gacgcaggtacaaagaaaacatgccgctaccaccaatacttcgctattaaagaagcacaa
cctcgcatagcttcccgtgaggggggaattatttggcatactcaaggatccggtaaaagc
ctcacaatggtgtggctagccaaatggatacgtgaaaatcaggagaatgcccgtgtttta
attatcactgaccgtactgaacttgataatcagatcgaattagtattcgatggtgtcaat
gaatctattgaacgagcatcttcagctaaaaacctgcttggactactaaacaagagccaa
ccatggttaatctgttcactcgtacacaaattccgtggtgacaatgagacatccactgat
gacactgaaagcttcctccagcatctgaagaaatcgcgttctgagggcttttcaccaaaa
ggcaatctatttgtattcgtggatgaagcacaccgcacccagagcggcaaactccacgca
gcaatgaaagaactgctacccgaagctatgttcattggcttcacaggtacacccttacta
aaaaaggataaagctaagagcattgaaacctttggctcttacatacacacctacaagttc
gatgaagccgttacagatggagtagtactagatctacggtacgaagctagggatattaga
caacgcctaactggtcaacaacaaatcgacaagtggtttgaagctcgaaccaaaggcatg
actgatctaacaaagtctcgcttaaaacaacgttgggcaacaatccgtgaaattgagtcc
tcagaacctagagtacgtatgatcgcacaggacatcattatggacatggacagtcagcca
cgtctaagcgatgggcgaggcaacgctatactcgtctgctcgagcgtgtaccaggcttgc
aagttctacgaaattttttccaaaagtcctctaactggaaaaatagcgatcatcacaagc
tatgagccgacagctgcttcaatctctaaagaagattccgggttaggccaaaacgaagca
atgtttaagtacgaagtttaccgaaaaatgctgtcagattacttcggtgtttctcaggac
gaagcagtaaagcggatccctgagtttgaaaaagaagtcaaagagacttttatcaatcac
ccaggacaaatgcgtctactcattgtcgtcgacaagcttctaaccggctttgatgctcct
agcgcaacttacctatatatcgacaagaagatgcaagaccacagtctatttcaggctatt
tgccgcgttaatcgtcttgatggaggtgacaaagattacggatacatcgtcgactatcgt
gatctcttccaatctatcaatgcggctgtcgatgattatacttccggagcattcgatgag
tacgagaaagaagacattgaaggtctgcttaagaatcgtgttgaagaagagcgaagagat
ctcgaagaagctcttgaatacgttcaggcgctatgtgaaccagtcgcgcctccgcgtggc
accttacaattccaacaatacttctgtgcaaaggacagcggcaatgctcaacaacttaaa
gacaatgaattgaagcgagttgatctctataaaggggtatctaagctggtgcgggctttt
gctaatattgctaacaaaatggcagaagccggttattccactaccgaagctcaacaaatc
cgcaaagaagtcgagttctactccgatgtatacgatgaggtaaaactcggagcaggtgac
aatgaagatatcaagcaattcgaagctggtattcgttcgcttctagatacctacgtctct
gcagagccttctagacccctggcatctttcgaacaaggtttagtcagcctgattgttgat
cgtggtaaggatgccatcgaaatgttgcctgaaggaaccaaaaaagacaagcgagctgta
gcagaaacaattgtaaacaatgttcgtaagactatcgtcgatgaacaagccatgaacccg
aagtactatgagaaaatgtcttcgctccttgacgagctcatcgagaaacgccaccaagac
agcataggctacgaagaatatttggaaaaactaattgaactagcgcaacatgttggtaag
ggttcaggagaagactccgagtatccaaattgggcaaatactcaagcacgtcaggctttt
attgattttgcttggccagaaggaattgttctagacttagaagatctttacaccgctatt
caacagaataaagaacatgactggccttctagcaaaccgaaaagaaaagctctagcacgc
accatccatctcaatacatctggaaaactagaaacctcagtcattgagaatctactatca
gttatcgaaagacacaatgagttccagtag

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