Corynebacterium sp. sy039: FQV43_05065
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Entry
FQV43_05065 CDS
T07955
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
cory
Corynebacterium sp. sy039
Brite
KEGG Orthology (KO) [BR:
cory00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cory03019
]
FQV43_05065
Enzymes [BR:
cory01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FQV43_05065
Messenger RNA biogenesis [BR:
cory03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FQV43_05065
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
SH3_HelY
ResIII
DEXQc_Suv3
Helicase_C
IstB_IS21
AAA_22
RecC_4th
MTR4-like_stalk
IPGAL1_C
YqjI_C
Motif
Other DBs
NCBI-ProteinID:
QDZ42598
LinkDB
All DBs
Position
complement(1117487..1120279)
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AA seq
930 aa
AA seq
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MTTKHLDFFQSSLSFSMDDFQVRGCELIEEGENVLVCAPTGAGKTIVGEFAVSLALAQGT
KCFYTTPIKALSNQKYHDLVADHGAENIGLLTGDVSINHDADVLVMTTEVLRNMIYVQSE
TLTRLSHVVMDEIHFLSDKTRGAVWEEAILGLDQDVCLIGLSATVSNSEEFGRWLHSVRG
STSVIVSEHRPVPLKQWMLVDKRLHQLFDDDGVSVNERLQRHVAKLEEKGFSANSHAKAG
GFRSRSAHTNGIEKFSAHAQRKNHHAFQPLSRPDVLKILNEQNMLPAITFIFSRSGCDSA
LYQCLRARFSLTTTEQAQEIARIVDRAVADIPKEDLRVLDFSRWKTALQRGFATHHAGML
PAFRHVVEELFSKGLVRAVFATETLALGVNMPARTVVLEKLVKFNGESHVELSPGQYTQL
VGRAGRRGIDTIGHAVVMWAPALDPKTVTELASTRTYPLNSTFAPGYNMAVNLLGTIGFE
PAHRLLEKSFAQYQADGSVVSEVREREQAEQNEKEWAEKLHKLIQSMAPPSEHPEQELLE
YIQLRRTLKDAEKQAKKQAGIEREKEVIRSLSRLKLGQVIALPTKKRPVLAVVVQPAKDN
HDPHPWVTMESGWSGKISADSLRMPPIIVGTMSLPRLAIARPRKGAASVVRAFARHHFDR
PKKMKLEAKARSNRRVLALRTQLRQSPVHYWADLEAAVLLGEKLLKARRTVAYLSEKISS
AKDTLGHTFDRIIELLAELDYVEFVEDSSSGTRLPQITDEGTRLAHIHTESDLLVAQCLK
RGIWNELDPAELAGVASMCCFENRKETRGQHRQTVQAASEAMENAMNNTIRLWDALSTDE
RRYRLPITRFPDAGFALAIHQWTAGAPLDYCLAAAAESGAELSPGDFVRYARQVVDLLEQ
IRTTAYTDEMRYSARQAADAIRRGVVAIGD
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgaccactaagcatttagatttttttcaatcttctctgtcattctccatggatgatttc
caggttcgtggttgtgaactgattgaagagggagaaaatgttttagtatgtgcgcctact
ggtgcaggaaaaacaatcgtcggtgaatttgcagtttcgttagctttagcacaaggcaca
aaatgcttttacaccacaccgattaaagcgctcagtaatcaaaaatatcacgatcttgtt
gcagatcatggtgcagaaaacattggtttattgactggtgatgtatccatcaatcatgat
gctgatgttcttgttatgaccacagaagtattgcgcaatatgatctatgtgcagtcggag
acgctgacacgacttagccatgttgtcatggacgagatccattttctctcagataaaact
cgtggcgcagtctgggaagaagcaattttaggtcttgatcaggatgtatgccttattggt
ttatcagcgacagtgagtaattctgaagaattcgggcgctggctccatagcgttcgcggc
agtacgtcagttattgtcagcgaacatcgaccagttccgttaaaacaatggatgctcgtc
gacaagcgcttgcatcaattattcgatgatgatggtgtcagcgttaatgagcggttgcag
cgacacgtcgctaagttggaagaaaagggtttctcggctaattcgcacgctaaagctggc
ggatttcgttcccgaagtgctcacactaatggcatagaaaaattctcagcgcatgcacaa
cgcaaaaaccaccatgcctttcagccattaagccggcctgatgtattaaaaatattgaat
gagcaaaatatgctgccggccatcacgtttattttttcgcgtagtggctgtgacagtgcg
ttatatcagtgtttgagggcacggttttcgctcactacgactgagcaggcacaagaaatc
gctcgtatcgttgatagagctgttgcagatatcccaaaagaggatctgagagttcttgat
ttttctcgctggaaaactgctttacagcgtggttttgctacccatcatgctggaatgcta
ccggcatttcgtcatgttgtggaggaattattcagcaaagggcttgtgcgtgccgtgttt
gcaacagagacattggcgcttggggtgaatatgccagcacgtactgtggtgttagaaaaa
ctggtgaaattcaatggcgaatctcatgttgaattatccccaggtcaatatacacaactg
gtagggcgtgctggtcgacgcggaatcgatactatcggacacgcagttgtcatgtgggca
ccggctctagatccgaaaactgttactgaactagcctctaccaggacttatcctctcaac
tctacttttgcaccgggctataatatggcggtaaatttgctgggcactattggatttgag
ccagcacatcggttattagaaaaatctttcgcccagtatcaggcagatggttcagtggta
agcgaagtacgtgaacgtgaacaagctgaacagaatgaaaaagagtgggcagaaaagttg
cataagctcattcaatcaatggctccgcctagtgagcaccctgaacaggagcttttagaa
tatatccaattgcgtcgtacgctcaaagatgcagaaaagcaggcgaaaaaacaagctggt
attgagcgcgaaaaagaggttattcgtagtttatccaggttgaagctggggcaagttatt
gctttgccaacaaagaaacgaccagtgcttgctgtggtcgtgcaacctgctaaagataat
cacgatcctcatccttgggtcacaatggaatctggttggtcagggaaaatctcggcagat
agtttacgaatgccaccgattattgttgggaccatgtcgttgccgcgcttggctattgca
cgcccgagaaaaggtgctgcaagtgtggtgagagcttttgcacggcatcattttgatcgt
cccaaaaagatgaagctagaggcaaaagctcgatcaaatcgcagagttcttgccttgcgt
acccagctacgccaaagccctgttcattattgggctgatttggaggcagcagttttattg
ggtgaaaagctactgaaggcgcgtcgcacagttgcatatctatctgaaaaaatttcttca
gccaaagatactcttggacacacttttgaccgcattatcgagttactggcggaactagac
tatgttgagttcgttgaagatagcagcagcggcacacgcctaccacagattaccgatgaa
ggaacacggctcgcgcacatacatactgaatcagatttgcttgtggcacagtgtctcaag
cggggtatttggaatgaacttgatcctgcagaacttgctggtgtggcgagtatgtgctgt
tttgagaatcgtaaagagactcgtggacaacataggcaaacagttcaggctgccagtgaa
gcaatggaaaatgctatgaacaatacgattagattgtgggatgcgttaagcaccgatgag
cgtcgttatcgcttgcccataactcgttttcccgatgcgggttttgctttggctattcat
caatggactgcaggtgcgcctttggattattgtttggctgctgcagccgaatcaggagcc
gagctcagccctggtgattttgttcgttacgcacgccaagttgttgatcttttagaacag
atacgtactactgcatacaccgatgaaatgcgctatagtgcacgacaagcagcagatgct
attcgacgtggtgtagtagccatcggtgattaa
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