Corynebacterium sp. sy039: FQV43_06180
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Entry
FQV43_06180 CDS
T07955
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cory
Corynebacterium sp. sy039
Pathway
cory03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cory00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FQV43_06180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cory03019
]
FQV43_06180
03016 Transfer RNA biogenesis [BR:
cory03016
]
FQV43_06180
Enzymes [BR:
cory01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FQV43_06180
Messenger RNA biogenesis [BR:
cory03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FQV43_06180
Transfer RNA biogenesis [BR:
cory03016
]
Prokaryotic type
tRNA degradation factors
FQV43_06180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
KH_2
RNase_PH_C
DUF4852
bHLH_NCOA
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
QDZ42788
LinkDB
All DBs
Position
complement(1359040..1361310)
Genome browser
AA seq
756 aa
AA seq
DB search
MSNNSTLIEYLEDPEIGITEAVATIDNGDFGTRTIRFETGQLARQADGSVTTYLDDDTML
LATTTASSQPREGFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTEAILACRLIDRPLR
PTFVKGLRNEVQVIVTVLSMNPQDMYDVVAINGASAATQLSGLPVSGPVGGVRMALLADE
AHPDGQWIAFPTHEQHEQAIFELVVAGRITTKKQGKKTIRDVAIMMVEAGATESAVERIA
QGGPAPTEKVVAEGIEAAKPFIELLCQAQEGLAQRVAKQTQQFPLFPPYSDEIFAAVEKK
AAKKLAQLLTIKDKQDRDEATNEYMEQIATELVDRFSDDDNYDATIKEIHAAYNAVMKKT
VRHMILTKNFRIDGRGLSDIRDLSVEVDLIPRTHGSSLFERGETQILGVTTLDMLKMEQS
IDSLTPTTSKRYIHHYNFPPYSTGETGRVGSPKRREIGHGALAERALIPVIPTREEFPYT
IRQVSEALGSNGSTSMGSVCASTLSLYNAGVPLKAPVAGIAMGLVSDEVDGEVRYVTLTD
ILGAEDAFGDMDFKVAGTAEFITALQLDTKLDGIPSKVLADALAQAREARLTILDTMSDV
IDTPDEMSSYAPRIMTTTVPVSKIGEIIGPKGKTINSITEQTGAEVSIEEDGTVFVSAES
GQAAEETIAKINAIANPQLPEVGERFLGEIVKTTAFGAFVSLTPGRDGLIHISKLGGGKR
IEKVEDVVSVGEKVEVEILDIDNRGKISLGLVEQES
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaacaactctactttgattgaatacttagaagatccggaaatcggtatcactgaa
gcagtagctacgattgataatggtgattttggtactcgtaccattcgctttgagactggt
cagcttgctcgtcaagctgatggttcggtaacaacatatctcgacgatgacaccatgcta
ttggctaccaccacagcatcaagtcagccacgtgaaggatttgatttcttcccgctcact
gtggacgttgaagagcgtatgtatgctgctggtcgtatccctggttctttcttccgcagg
gaaggtcgtccttctacggaagcaattttggcgtgtcgccttattgaccgtccacttcgc
cctactttcgttaaagggctacgcaatgaagtacaggttattgtcaccgttttgtccatg
aaccctcaggatatgtatgacgttgtggccattaacggtgcctcagccgctacacaacta
tctggtttaccagtttctggtccagttggtggtgtgcgcatggcgctattggctgatgaa
gctcatccagatggtcagtggattgctttcccaactcatgagcagcatgagcaagcaatt
tttgagcttgtagttgctggacgcattaccactaaaaaacaaggcaaaaagactatccgt
gatgtagcaatcatgatggtagaagccggtgcaacagaatctgctgtagaacgtattgca
caaggtggcccagcgccaactgagaaagtcgttgccgaaggtattgaagctgcaaagccg
ttcattgagttattgtgccaggcacaggaagggttagcgcaacgagtcgctaagcaaact
cagcaattcccattattccctccttattctgatgagatttttgctgctgtggaaaagaaa
gcagcaaagaaattagcgcagcttttgacgatcaaagataaacaagatcgtgatgaagca
actaatgagtacatggagcagatcgccacagagctggttgatcgtttcagtgatgacgat
aactatgacgctactatcaaagaaattcatgctgcatataacgcagtgatgaaaaagact
gtgcgtcatatgattctcactaagaatttccgtatcgacggacgtggtcttagtgatatt
cgagatcttagcgtggaagtagaccttattcctcgtacacacggttcatcattattcgag
cgtggtgaaacacagattcttggtgtgactactcttgatatgttgaagatggagcaatca
attgattcgctcacaccaaccacctcaaaacgctatatccaccactacaatttcccacct
tattccactggagaaacaggacgtgtgggttcaccaaagcgtcgtgagattggtcatggt
gctctagctgagcgtgctcttattccagttattccaactcgtgaggaattcccttatacg
attcgacaagtatctgaagccttgggttctaacggatctacctcaatgggttcagtgtgt
gcatctacattatctctatacaatgctggtgtgccgcttaaggcaccagttgcaggtatc
gcaatgggactagtatctgatgaggtagatggcgaagtacgctatgttactttgacagat
attcttggggcagaagatgctttcggtgatatggactttaaggtagctggtaccgcagag
ttcattacggcattgcagttggatactaaacttgatggcattccgtcgaaagtgcttgct
gatgcgttggctcaggcacgtgaagcgcgtttgaccattttggatactatgtctgatgtt
atcgatacaccagatgaaatgagttcatatgcaccgcgtatcatgacaacaacagtgcct
gtatcaaaaattggtgaaataatcggccctaaaggcaagacgatcaatagtattaccgag
cagactggtgctgaggtgtccatcgaagaagatggaacagtatttgtttctgctgagtct
ggtcaagcagctgaggaaacaattgcgaaaattaatgcgattgctaatccacaattgcct
gaggttggggaacggttcctcggggaaatcgtaaaaacaaccgcttttggtgcctttgtt
tctttgacacctggtcgtgatggactcatccacatttctaagctaggtggcggaaagcgc
attgaaaaggttgaggatgtggtcagcgtaggcgaaaaggtcgaggtagaaattctcgac
attgataatcgcggaaaaatatctttggggcttgtagaacaagagtcttaa
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