Corynebacterium sp. sy039: FQV43_08585
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Entry
FQV43_08585 CDS
T07955
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cory
Corynebacterium sp. sy039
Pathway
cory03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cory00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FQV43_08585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cory03021
]
FQV43_08585
03400 DNA repair and recombination proteins [BR:
cory03400
]
FQV43_08585
Enzymes [BR:
cory01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FQV43_08585
Transcription machinery [BR:
cory03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FQV43_08585
DNA repair and recombination proteins [BR:
cory03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FQV43_08585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
CBX7_C
DUF496
Motif
Other DBs
NCBI-ProteinID:
QDZ43204
UniProt:
A0A5B8NWQ1
LinkDB
All DBs
Position
complement(1908757..1912764)
Genome browser
AA seq
1335 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
PPKDLERIIYFAANIITSVDEEARHNDMSTLEMEMLLEKKDVEADAESEIAERAQKLEED
LAELEAAGAKADARRKVQNAAEKEMSSIRQRAELEIDRLEEIWQTFVKLSPKQMIIDDSI
YEELVDRFEDYFTGGMGAEAIQTLIRNFDLDKEAEELREIIKNGKGQKKTRALKRLKVVA
AFQRSGNDPAGMVLDCIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVNGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQR
PEVWDVLEEAIAEHPVMLNRAPTLHRLGIQAFEPKLIEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLASNNILSPASGKPLAMPRLDMVTGLYFLTMNKTNGEFGSQ
GAYAPATENGPATGVYSSYAEAIMAYDRGVLGLQAKIKVRISHLRPPADIEAELFPEGWE
QGQSWLADTTLGRVMFNELLPWNYPYLEGVMVRKGGGSDKLMLGDVINDLAAKYPMITVA
QTMDKMKDAGFYWATRSGVTITMSDVLVLPNKDEILDSYESEARKIERKYWEQGALTERE
RYDRLVELWKDATDTVGNAVEALYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKG
DYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVRED
DCGTRQGIRVPVAVEVKDAQGEVTGYRAHDLIETSVSGRVVATDVTVNDETIVSAGENLT
EEIIAKLVDAGITRVKVRSVLTCQTATGVCAKCYGKSMASGQLVDIGEAVGIVAAQSIGE
PGTQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNRAPIASVAGTVSLTDEGNFYTLT
ITPDDGSDDVIYEKLSKRQGLASIRVPMENNPGAFIERTLREGDHVEVGERLLRGPADPH
DVLEVLGRRGVEQHLVDEVQAVYRAQGVAIHDKHIEIIIRQMLRRGTVIESGSTEFLPGT
LVDLSEAKAANAEAVAAGKQPAELRSEIMGITKASLATESWLSAASFQETTRVLTDAAIN
KRSDKLIGLKENVIIGKLIPAGTGIARYRNIAVKPTEAARNAAYSIPTYGDSIYGDDGYG
EFTGASIPLDDAFNS
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
gtgttagacgtcaatttcttcgatgagctccgcatcggcctggctacagccgacgacatc
cgtcgttggtctaaaggcgaggtcaagaagccggagaccattaactaccgtactcttaag
ccagagaaggacggcttgttctgtgagcgcatcttcggtccaacccgcgactgggaatgt
gcttgtggtaaatacaagcgtgtccgctacaagggcattatctgtgaacgctgtggcgtt
gaagtaaccaagtccaaggtgcgccgtgagcgtatgggacacattgaacttgctgcacca
gtaacacacatctggtacttcaagggtgtgccatcacgcctaggctacttattggatcta
cctccaaaagacctcgagcgtatcatttacttcgccgctaacatcatcaccagcgttgat
gaagaagcgcgtcacaatgatatgagcacccttgaaatggaaatgctgctcgaaaagaaa
gacgttgaggcagatgccgagtctgaaattgctgagcgcgcgcaaaagctagaagaagat
ctagctgaacttgaggcagctggtgccaaagcagatgcacgtcgtaaagtgcaaaatgct
gcagaaaaggaaatgagcagcattcgccaacgcgctgagctggaaatcgaccgcttggag
gagatttggcaaacattcgtcaaactctcgccaaagcagatgatcatcgacgactctatc
tatgaagagcttgttgatcgcttcgaggactacttcaccggtggcatgggtgcggaagca
atccagaccctcatccgtaactttgacctcgacaaagaggcagaggaactacgcgaaatc
atcaagaatggtaaaggtcagaaaaagacccgtgccctcaagcgcctcaaagttgttgca
gctttccagcgctccggtaatgatccagcaggaatggttcttgactgcattccagtcatt
ccaccagagttgcgcccaatggtgcagctagacggtggtcgctttgcgacctccgacctc
aacgacctttaccgtcgtgtgattaaccgcaataaccgcctcaagcgcatgattgatctt
ggcgcacctgagatcatcgtgaacaacgaaaagcgtatgctacaagaatctgtggatgcg
ctcttcgacaatggtcgtcgcggtcgcccagtgaacggtccaggaaaccgaccactgaag
tccttgagcgatctgctcaagggtaagcaaggacgtttccgtcagaacctcttgggtaag
cgtgttgactactctggtcgttccgttattatcgtcggtccgcagctcaaactgcatgaa
tgtggtttgccaaaactgatggctttggagctgttcaagccattcgtgatgaagcgtttg
gtggaaaacgattatgcgcaaaacatcaagtccgcaaagcgcatggtggagcgccagcgc
ccagaggtgtgggacgttctcgaagaggctattgccgagcacccagtgatgctcaaccgt
gcaccaaccctgcaccgtctaggtattcaggcattcgagcctaagctgatcgaaggtaaa
gcaatccagctccacccactagcgtgtgaggcattcaacgctgacttcgacggtgaccag
atggctgtgcacctgccactatccgcagaggcacaagctgaggctcgcgtattgatgctt
gcgtcgaacaacattctatccccagcgtctggtaagccattggctatgcctcgtctggac
atggtgactggtttgtacttcctcaccatgaacaagaccaatggggaatttggttcccag
ggagcctatgcacctgcgaccgaaaatggtccagcaacgggtgtatattcttcctacgca
gaagccatcatggcatatgaccgtggtgtgcttgggctacaggcgaaaatcaaggtacgg
attagccacttgcgcccaccagctgatattgaagctgaactcttcccagaaggctgggag
caaggacaatcctggttggctgacaccaccctcggtcgagtaatgttcaacgagctcttg
ccgtggaactacccataccttgaaggcgtgatggttcgtaaaggtggcggcagtgacaaa
ctcatgcttggcgacgtcatcaatgaccttgcagctaaatacccaatgatcactgtggct
cagaccatggataagatgaaagacgccggtttctactgggcaactcgctctggcgttacc
atcaccatgtctgacgtgcttgtcttgccaaacaaagacgaaatccttgactcctacgag
agcgaggcacgcaagatcgagcgcaaatactgggagcagggtgctcttactgagcgcgaa
cgctatgaccgtctcgttgaactctggaaagatgcaactgacactgtgggtaacgcagtc
gaagcactctacccagatgacaacccaatcccaatgatcgtgaagtccggtgctgccggt
aacatgcgtcagatctggacccttgctggtatgaagggtatggttgtgaactcaaagggt
gactacatcacccgcccaattaagacctccttccgtgaaggtctgtcggtgctcgagtac
ttcaacaactcccacggttcccgtaaaggtcttgccgataccgcgttgcgtactgctgac
tctggttacctcacccgtcgtctggtggacgtggctcaggatgttatcgttcgcgaagac
gactgtggcacccgccaaggtatccgcgttccagtggcagtagaagtaaaagatgctcaa
ggcgaagtcaccggttaccgcgcccatgacctcatcgaaaccagtgtgtctggtcgtgtt
gtcgcaaccgacgtaactgtcaatgatgaaacaatcgtttccgcaggtgaaaatctcact
gaagaaatcattgcgaaactcgtcgacgctggtattacccgtgtgaaagtacgctccgta
ctaacctgccagactgcaacaggtgtgtgtgctaagtgctatggcaagtccatggcatct
ggtcagctcgtggatatcggcgaagccgttggtattgtggcagcgcagtccattggtgag
ccaggtacccagttgacaatgcgtaccttccaccaaggtggtgttggtggcgatattacc
ggtggtttgccacgtgttcaggaactcttcgaggcacgtgtaccaaagaaccgcgcacct
atcgcctccgtagccggtaccgtcagcttgactgatgagggtaatttctacactctcacc
atcactcccgacgatggctccgatgatgtcatctacgagaagctatccaagcgtcagggt
ctagcatcaatccgcgtgccaatggagaacaacccaggtgcattcatcgagcgcactctg
cgtgaaggcgaccacgttgaagttggtgaacgactcctccgcggacctgctgatccacac
gacgttcttgaagtgctcggacgacgtggcgtcgaacagcacctcgttgatgaagtacaa
gctgtgtaccgtgcacagggtgtggcaattcacgataagcacattgagattattattcgc
caaatgttgcgtcgtggaacagtgattgaatcaggatctaccgagttcctaccaggtact
ctcgtggatctctccgaggcaaaagcagcaaatgctgaggcagttgccgcaggtaagcag
ccagcggaattgcgctctgagatcatgggtatcaccaaggcttccttggctaccgaatca
tggctctctgctgcttccttccaggagacaacccgtgtgcttaccgacgctgccattaac
aagcgttccgataagctcatcggtctgaaagaaaacgtcattatcggtaaactcatccca
gctggtaccggtattgctcgttaccgcaacattgcagtgaaaccaactgaggctgcacgc
aatgctgcatactccatcccaacctatggtgactccatctacggtgacgatggatacggt
gaattcaccggcgcatccattccattggatgacgcattcaactcctaa
DBGET
integrated database retrieval system
