Chryseobacterium oryzae: MTP08_01650
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Entry
MTP08_01650 CDS
T08538
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
corz
Chryseobacterium oryzae
Brite
KEGG Orthology (KO) [BR:
corz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
corz03032
]
MTP08_01650 (topA)
03400 DNA repair and recombination proteins [BR:
corz03400
]
MTP08_01650 (topA)
Enzymes [BR:
corz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MTP08_01650 (topA)
DNA replication proteins [BR:
corz03032
]
Prokaryotic type
DNA Topoisomerases
MTP08_01650 (topA)
DNA repair and recombination proteins [BR:
corz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MTP08_01650 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
UOE38513
LinkDB
All DBs
Position
350060..352630
Genome browser
AA seq
856 aa
AA seq
DB search
MSKNLVIVESPAKAKTIQKYLGKDFEVKSSFGHIRDLPKKGMGIDLATFSPDYEVSADKK
KLVTELKSAVKKAEMVWLASDEDREGEAIAWHLAEELKLKPENRKRIVFHEITKNAILKA
IEHPRDIDQNLVNAQQARRVLDRIVGFEMSPVLWKKVKPGLSAGRVQSVAVRLVVEREKE
IRSFVPKASFKLDGIFLNDANQEISAKLKKDFNKESEAENFLESAKNTEFKVLNVETKPG
SRSASAPFTTSTLQQEASSRLGYNVTNTMRLAQRLYEEGYITYMRTDSVNLSQEAIEGAK
KQIVSEYGAEYSSPRNYTTKSSSAQEAHEAIRPTDFSVKAIGDAQLSKLYQLIYRRTLAS
QMANAKIEKTVIEIGNAKLPQHFEAQGEVIIFDGFLKAYGIVKTEDDDEENNEKLLPKVT
VGEVLSYKKITATEKFTKPSARYTEAGLVRKLEELGIGRPSTYAPTIQTIQNREYVDKRE
IEPQTREVVKFSLVKEVIKKEVLDEKFGGDKNKFVPTDIGEVVNDFLTDNFTEILDFGFT
AKVEESFDEIANGGQKWKEMMTDFYSKFHPRIEDVEENADRANGERLLGVDPKTGKNVNA
RIGRFGPMIQIGEQDDEEKPVFASLLSGQNIATITLEEALELFKLPFDLNEVDGHPVTIG
VGRFGPYVKWGETYISIPKGEDPLSVDQSRAEEIINEKKLADAPIANYKGEPITKGSGRF
GPFIKYKSVFINVPKRYNFDNLSQSDINELVEAKLEKEANRYIQQWEAEKISIENARWGP
IVKHGKNIYKIPKKKDDTKYESEDLKEVSLDEVKKWITAQDPKAFAEKKKPTAKKPATKK
ATTAKKTVAKKPATKK
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaatttagtaatcgttgagtctccggcaaaagcaaaaactattcagaagtat
ttaggtaaagattttgaggtgaagtccagctttgggcacatccgggatttgcctaaaaaa
ggaatgggaatagatttggccacattcagcccagattacgaagtttctgccgacaaaaag
aaactggttacagaattaaaatcagcagtaaagaaagccgaaatggtttggctcgcttcc
gatgaagaccgtgaaggagaggcaattgcatggcatttggcagaagaattgaagctgaaa
cccgaaaacagaaaaagaatcgtctttcacgaaattactaaaaatgctattcttaaagcc
atagagcatccaagagacatagatcaaaacttggtaaatgcacaacaggcaagaagagtt
ctcgacagaattgtaggtttcgaaatgtctcccgttctttggaaaaaagtaaaaccggga
ctttctgccggcagagtacagtcggttgccgtaagattggtggtagaaagagaaaaagag
atccgcagttttgtaccaaaagccagtttcaagctggatggtattttcttgaatgatgcc
aatcaggaaatttctgcaaaacttaaaaaagatttcaataaagaatccgaagctgaaaat
tttttagaatcggcaaaaaatacagagttcaaggttttaaatgtggaaactaaaccggga
agccgctctgcatctgctccatttactacctctacacttcagcaggaagcatcatcaaga
ctgggatataatgtaaccaataccatgaggcttgcccaaagactttatgaagaaggatac
attacttatatgagaaccgattcggtaaatctttctcaggaagccattgaaggtgctaaa
aaacaaattgtctcagaatatggagccgaatactcttctccgagaaattatactaccaaa
tcttcatctgcacaggaagctcacgaagccattcgcccaacagatttttctgtaaaagca
attggtgatgctcaattgagcaaattgtaccagctgatttacagaagaacactggcttcg
cagatggcaaatgctaaaatagagaaaacagttatagaaataggtaacgcaaaacttcct
cagcatttcgaagctcagggagaggttattatttttgatggtttccttaaggcttacgga
attgtaaagactgaagatgatgatgaagaaaataacgaaaaactattaccgaaagttact
gtaggtgaggttttaagctataaaaagattactgcaacagaaaaattcaccaaaccaagt
gcaaggtataccgaagctggtttggtaagaaaactggaagaattgggaatagggcgtccg
tctacctatgcacctaccattcagacaattcaaaaccgtgaatatgttgataaaagagaa
atagagccacaaacgagagaggtggtgaaattttctttggttaaagaggtcattaaaaaa
gaagttcttgacgaaaaattcggtggagataaaaataaatttgttcctaccgacatcggg
gaagtggttaatgactttttaacagataattttacggaaattctggacttcggatttacg
gcaaaagtagaagagagttttgacgaaattgcgaatggaggtcagaagtggaaagaaatg
atgaccgatttctactcgaaattccatccgagaattgaagatgtggaagaaaatgcagac
agagccaatggagaacgtcttttgggagtagatcccaaaacaggaaagaatgtgaacgcc
agaatcggaagatttggtcctatgattcagattggtgagcaggatgatgaagaaaaacct
gtttttgcatcgcttttatcagggcaaaatattgctaccattacgttggaagaggctttg
gaacttttcaaacttccatttgatcttaatgaagtagacggtcatccggttaccattggc
gttgggagattcggtccatatgtaaagtggggcgaaacgtacatcagcattcccaaaggt
gaagatcctctttctgtagaccaaagccgtgcagaagaaattattaatgaaaaaaaattg
gcagatgcaccgattgccaactataaaggggagcctattaccaaaggtagcggaagattc
ggacctttcataaagtataaaagtgttttcatcaacgttccgaaaaggtataatttcgat
aatctttctcaaagtgatatcaacgaattggtggaagctaaattagagaaagaagccaac
cgttacattcaacaatgggaagctgaaaaaatctccattgaaaatgcaagatggggtcct
atcgtaaaacacggaaaaaatatttataaaattccaaagaaaaaagacgataccaagtat
gaaagtgaagatttgaaagaagtatctttggatgaggtgaaaaaatggattaccgcacag
gatccaaaagcttttgccgaaaagaaaaagcctacagctaagaaacctgcaactaaaaag
gcaacgacagctaaaaaaacggttgccaaaaaaccagcaacaaagaaataa
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