Chryseobacterium oryzae: MTP08_05940
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Entry
MTP08_05940 CDS
T08538
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
corz
Chryseobacterium oryzae
Pathway
corz03030
DNA replication
corz03430
Mismatch repair
corz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
corz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MTP08_05940 (dnaX)
03430 Mismatch repair
MTP08_05940 (dnaX)
03440 Homologous recombination
MTP08_05940 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
corz03032
]
MTP08_05940 (dnaX)
03400 DNA repair and recombination proteins [BR:
corz03400
]
MTP08_05940 (dnaX)
Enzymes [BR:
corz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MTP08_05940 (dnaX)
DNA replication proteins [BR:
corz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MTP08_05940 (dnaX)
DNA repair and recombination proteins [BR:
corz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MTP08_05940 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA_22
RuvB_N
AAA_30
AAA_14
Rad17
AAA_5
AAA_16
RCF1-5-like_lid
TIP49
nSTAND3
AAA_7
AAA_24
DNA_pol3_delta_C
AAA_18
ABC_tran
AAA_19
RNA_helicase
AAA_assoc_2
AAA_2
NTPase_1
RsgA_GTPase
AAA_33
SRP54
NPHP3_N
Sigma54_activ_2
DUF815
TsaE
GNAT_acetyltr_2
DEXQc_Suv3
AAA_11
Endonuc_subdom
AAA_28
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
UOE39312
LinkDB
All DBs
Position
1293997..1295079
Genome browser
AA seq
360 aa
AA seq
DB search
MENFIVSARKYRPQQFDTVVGQSHITDTLEHAIEENQLAQALLFCGPRGVGKTTCARILA
RKINEKDGSVSEDGFAYNIYELDAASNNSVDDIRELIDQVRFAPQVGQYKVYIIDEVHML
SSAAFNAFLKTLEEPPAHAIFILATTEKHKIIPTILSRCQIYDFKRITILDIQNHLKKIA
EKESIQYEDDALYLIAQKADGALRDALSIFDRLSTFSQKNITLAKAAEVLNILDYDQYLN
IADLAKESKIPEVLSAFNEIVKKGFDPHLFIAGLGNHFRDLMMAQNASTVDLIEVGEQTK
QKFVEQAKNWSPQNLIDGIEICNHADINYKNSKNPRLTVEIALMQLSSLSNGLDSKKKSL
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattttattgtatctgctagaaagtatcgtcctcaacagtttgacactgtcgtt
gggcaatctcatattacagatacattagagcatgcgatagaagaaaatcaacttgctcag
gctttgcttttctgtgggccgagaggagtagggaaaacaacatgtgccagaattcttgcc
agaaaaatcaatgaaaaagacggttctgtttccgaagacggttttgcgtacaatatatat
gagctggatgctgcttctaataattccgtagacgatataagagaattaatagatcaggta
cgttttgctcctcaggttgggcagtacaaagtctatattatagacgaggttcacatgctt
tcttctgcagctttcaatgcatttttgaaaacattggaagaacctcctgctcatgcaatt
tttattttggcaactaccgaaaagcataaaattattccaacgattttatcgagatgtcag
atttatgattttaaaagaattacaattcttgatattcagaatcatcttaaaaaaatagca
gaaaaagaaagcattcagtatgaagatgatgcactgtatcttatcgctcaaaaagcagat
ggcgcactaagagatgctttatctatttttgataggctttctacattttctcaaaaaaac
attacccttgcgaaagctgcggaagttctcaatattttagactacgatcagtatcttaac
attgcagatttagccaaagaaagtaaaattccggaagttctttctgcttttaacgaaatt
gtaaaaaaaggtttcgatcctcatctttttattgcgggtttagggaatcatttcagggat
ttaatgatggctcagaatgcttcaacagtagatttaattgaagttggagaacaaactaag
caaaaatttgttgaacaggctaaaaattggagtcctcaaaatcttattgatggaatagaa
atctgcaaccacgcagatattaattataaaaactccaaaaatcccagacttacggtggaa
attgcattaatgcagttgtcttcactttcaaacggattagattcaaaaaaaaaaagttta
taa
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