KEGG   Chryseobacterium oryzae: MTP08_06180
Entry
MTP08_06180       CDS       T08538                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
corz  Chryseobacterium oryzae
Brite
KEGG Orthology (KO) [BR:corz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:corz03400]
    MTP08_06180
Enzymes [BR:corz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MTP08_06180
    5.6.2.6  RNA 3'-5' helicase
     MTP08_06180
DNA repair and recombination proteins [BR:corz03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    MTP08_06180
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: UOE39358
UniProt: A0ABY4BNR3
LinkDB
Position
complement(1340120..1342567)
AA seq 815 aa
MTTFQNTNGFKIIQNWMMEKSISPFKFQVQTWQKFGSGYSGMVIAPTGFGKTYSVFLALI
SDFLNHPEAYQSGLKMIWITPLRSLSKDIAKAMQEAIDGIGLDWTVGVRNGDTDPKIRQQ
QVKNMPEILVATPESLQLLLGQKNHQRFFKNMKTIVVDEWHELLGSKRGVLVELGISQLR
KYVPKLKIWGITATIGNLDEAMEVLIPYDIKKTKITAKEHKKIEILPVFPDEVEILPWAG
HLGQKLADKVVPIILNSKSTIVFTNTRSQSEMWYQLLLNVYPDFAGQIAIHHSSIDSELR
SWIEENLSSGKLKAVVSTSSLDLGIDFKPVDTVIQIGSAKGVARFLQRAGRSGHSPFETS
KIYCVPTHSLELIEVSALKEAVSQNVIEPREPQVLCFDILVQFLMTLAIGDGFYPQETYE
RIRQIYTFQEITDEEWKSVIEFLTIGGSALKSYEEYHKVVVMEDGLHKVTSRRIAMLHRM
NMGAIVSDAMLKVKFISGGYIGMVEEYFISRLKKEEKFILAGRVLEVAMIKDMTVFVRAS
KGKAQAPSYLGGRLPLSSNLGQFLREKLSIALNPKASEKELKFLHPLLINQEERSHIPKE
DEFLVEMIKTREGYHLFMYPFEGRLVHEVMAALIAFRISKLAPISFSMAMNDYGFELFSD
KEIPLNEKNLDTILTRENLMTDVISSINAAEMARRKFRDIAVISGMVVQNFPGQQRSNKS
LQSSAGLIFKVLEDHDPNHFLVRQAYTEVFNMQLQEHRLVEAFKRIEKSKIVLKFANAFT
PLSFPIKVDSLRQTLTSEDLDARIQKLILQARKIK
NT seq 2448 nt   +upstreamnt  +downstreamnt
ttgacaacattccaaaacaccaacggcttcaaaatcatccaaaactggatgatggaaaaa
tcgatttcgccttttaaatttcaggttcagacttggcagaagtttggaagcggttacagc
ggaatggtcattgctccaaccggttttgggaaaacttattcggtttttttagctttgatt
tctgatttcctcaatcatccagaagcctatcaaagcggactgaaaatgatttggattacc
ccactccgttccctgtccaaagatatcgccaaagcgatgcaggaagccattgacggaatt
ggtctggattggacagtcggcgtcagaaacggagatacagacccgaaaatccgtcagcaa
caggtcaaaaatatgcctgaaattttggtggcaacgccagaaagtttgcagttattatta
ggacagaaaaatcatcagcgttttttcaaaaacatgaagacaattgttgtggatgaatgg
cacgaattgttaggctccaaacgtggtgttttggtagagttgggaatttcgcagctcaga
aaatatgttccgaaactgaaaatctggggaatcacggcaacgattggaaatcttgatgaa
gccatggaagttttgattccttatgatatcaaaaaaacaaaaattacggctaaagaacat
aagaaaattgagattcttcccgtttttcctgacgaagttgagattctgccttgggctggt
catctcgggcaaaaactggcagataaagtcgtcccgattatcctcaattccaaatcgacg
attgtcttcacgaataccagaagccagagcgagatgtggtaccagcttctgctgaatgtt
tacccggattttgccggacaaatcgccatccatcacagttcgatagattcagaattacga
agctggattgaggaaaatctaagttccggaaaactgaaagcggttgtttctacatcgtcg
ctggatttgggaattgattttaaaccggttgatactgtgattcaaatcggttctgcaaaa
ggcgttgcgagatttctgcaacgtgccggccgaagcggtcactcccctttcgaaacgtcg
aaaatctattgtgtccccacgcattctttagaactcatagaagtttctgccctaaaagaa
gccgtgagtcaaaacgttattgaacctcgtgaaccgcaggttttatgcttcgacattctg
gttcagttcctgatgactttggcgattggcgacggattttatcctcaagaaacctacgaa
agaatcaggcagatttacacgtttcaggagattactgatgaagaatggaaatcggtaatc
gaatttctcaccattggcggaagtgctctgaaaagctatgaagaatatcacaaagtggtg
gtaatggaagatggcctacacaaggtgacatcccgaagaattgcgatgctgcaccggatg
aatatgggtgcgattgtgagtgatgcgatgctgaaagtaaaatttatttccggcggctat
atcgggatggtggaagaatattttatctcgaggttaaaaaaagaagagaaatttattttg
gcaggtagagttctagaagtagcgatgataaaggatatgacggtttttgtccgggcttcc
aaaggaaaagcacaggctccgagttatctgggcgggagattgcctttgagctctaatctt
ggtcagtttttacgtgaaaaattatccattgctttaaatcctaaagcctcggagaaagaa
ctgaaatttctgcatccgcttttaatcaatcaggaagaacggtcgcacattccgaaagag
gatgaatttttggttgaaatgattaaaacccgagaaggttatcacctgtttatgtatcct
ttcgaagggcgattggtgcacgaagtgatggccgctttgattgccttccggatttcaaaa
ctggcgccgatttcattttcaatggcgatgaatgattatggttttgaattgttcagtgat
aaggaaattccgcttaatgaaaagaatttagacacaattttaacccgtgagaatctgatg
accgatgtgatttccagcatcaatgccgccgaaatggcacgacggaaattccgtgatatt
gcggtgatttccggaatggtggtgcaaaatttccccgggcagcagcggtccaacaaatca
ttacaaagttctgccggattaatctttaaagttttggaagaccacgaccccaatcatttt
ttggtgcggcaagcatacacagaagtttttaatatgcagcttcaggaacatcgattggta
gaagcttttaaaagaatcgaaaaatcaaaaatcgtcctgaaatttgccaatgcttttaca
ccactaagtttcccgataaaagtcgatagtctgcgtcagactttgacgagtgaggatttg
gatgcgaggatccagaaattgattttgcaggcgcggaaaattaaatag

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