Chryseobacterium oryzae: MTP08_07775
Help
Entry
MTP08_07775 CDS
T08538
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02481
two-component system, NtrC family, response regulator
Organism
corz
Chryseobacterium oryzae
Brite
KEGG Orthology (KO) [BR:
corz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
corz02022
]
MTP08_07775
Two-component system [BR:
corz02022
]
NtrC family
Unclassified
MTP08_07775
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_2
AAA
AAA_5
AAA_19
AAA_7
Mg_chelatase
AAA_30
NB-ARC
nSTAND3
AAA_16
Arm-DNA-bind_2
TsaE
AAA_22
DUF815
T2SSE
C02F5_12_N
nSTAND6
BRCT_3
Motif
Other DBs
NCBI-ProteinID:
UOE36969
UniProt:
A0ABY4BDK8
LinkDB
All DBs
Position
1698448..1699797
Genome browser
AA seq
449 aa
AA seq
DB search
MNTILIIDDEEKIRTLLSRIISLEGFEVSQASDLKNAKKRLEMSEFDVVISDVKLPDGSG
VEFSRIIKEKHPATEVILLTAYGNIPDGVQAIKNGAFDYITKGDDNNKIIPLVYKAVEKV
VLNKRVIQLEKQLGDKLSFDNIIGKSKTIQSAIESAKKVAVTDATVLLTGETGTGKEVFA
QAIHNASNRTKHNFIAINCSAFSKELLENELFGHKAGAFTGAVKDAKGIFEEANNGTVFL
DEIGEMALDLQAKLLRVLESGEFLKVGDNKPTKVNVRIVAATNRDLQSEIENGNFREDLY
YRINIFNIQLPPLRERVIDIEDLAKYFLIKFNKKAGKKKSAISPEYLEALKQHSWKGNIR
ELRNIIERSIILSDNEELKVESLPSEFQISNNNQQQSTKPLSAFELASAEKIHIQKVLNY
ANGNKTKSAELLGIALTTLYRKIEEYQIK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
ttgaacacaattctaattatcgacgacgaagaaaaaatcagaacattactttccagaatt
attagtcttgaaggttttgaagtttcccaagcttctgatttgaaaaacgctaaaaaacga
cttgaaatgtcagaatttgatgtcgtaatcagtgatgtcaaacttcctgacggaagtggt
gttgagttctccagaatcatcaaagaaaaacatcctgcaaccgaagtgattcttctgacg
gcttacggcaatattccggatggagttcaggcgataaaaaatggcgcttttgattatatc
acaaaaggcgatgataacaacaaaattatcccgttggtgtacaaagctgtggaaaaagtg
gtgctcaacaaacgtgttattcagctcgaaaagcaattgggagacaagctttcttttgat
aatattattggaaaatcaaaaaccattcaatctgcaattgagtctgcaaaaaaagtagca
gttaccgatgcaactgtccttttaacgggagaaacaggaacaggaaaggaagtctttgca
caggctattcataatgcgagcaacagaaccaaacacaattttattgcaataaactgttct
gctttttctaaagaattgttggaaaatgaattattcgggcacaaagcgggcgcatttact
ggtgcagtaaaagatgcaaaaggaattttcgaagaagccaataacggaactgttttcttg
gatgagattggcgaaatggctttagatttacaggcaaaactgctgcgtgttttagaatcg
ggagaatttctgaaagtaggagacaacaagcctacgaaagtcaatgtgagaatagtagcg
gcaaccaaccgtgatttacagagtgaaatcgagaatggtaatttccgagaagacctttat
taccgtattaatattttcaatattcagcttcctccgcttcgtgaaagagtgattgatatt
gaggatttggctaaatattttttaattaaattcaacaaaaaagctggtaagaaaaagtct
gccatttctccagaatacctcgaagctttgaaacaacattcctggaaaggaaacatccgt
gaacttagaaatatcatcgaaagaagcattattctaagtgataatgaagaattgaaagtt
gaaagtttaccaagtgaatttcaaatctcaaacaacaaccagcaacaatcaaccaagcct
ttatcagcatttgaattggcgagtgcagagaaaattcacatccaaaaagttctgaattac
gccaatggaaataagacgaaaagcgcagaattactcggaattgcattgactactttgtac
cgaaaaatagaggagtatcaaattaaataa
DBGET
integrated database retrieval system
