KEGG   Chryseobacterium oryzae: MTP08_08850
Entry
MTP08_08850       CDS       T08538                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
corz  Chryseobacterium oryzae
Pathway
corz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:corz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MTP08_08850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:corz03019]
    MTP08_08850
Enzymes [BR:corz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     MTP08_08850
Messenger RNA biogenesis [BR:corz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     MTP08_08850
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 ERCC3_RAD25_C Phage_integrase Helicase_C_2 P-loop_SecA Cas3-like_C_2 HEM4 AAA_22
Other DBs
NCBI-ProteinID: UOE37176
UniProt: A0ABY4BDF9
LinkDB
Position
1923014..1924282
AA seq 422 aa
MLFTDLKLIKPILDALQTEGYEKPTPIQEQAIPSILEHRDVLGTAQTGTGKTAAFAIPIL
QNLTERKAPKNNFIKALILTPTRELAIQIEESFNAYGRNLPLRKLVIFGGVKQGNQEAAL
RKGVDILVATPGRLLDFVAQGIISLKNLEIFVLDEADRMLDMGFVHDVKRIIKLLPQKRQ
TLFFSATMPTEIQKLADSILNTPIKVSVTPISSTAETIKQAVYFVEKENKLDLLTHILKN
NISDSVLVFARTKHGSDKIARKLQQSQITAEAIHGNKSQNARQNALNNFKSGKTRVLVAT
DIAARGIDIDELKYVINFELSDVAETYVHRIGRTGRAGAKGSSISFVDGLDLLNLKDTEK
LIGMKIPVVKDHPYHTDDLVVQKRDSNNKPFVPKPKSSHPTQQRKDIGFKKPKNKSNFSR
KK
NT seq 1269 nt   +upstreamnt  +downstreamnt
ttgttatttaccgacttaaaattgattaagcccatcttagatgcgcttcaaactgaagga
tacgaaaagccaactcccattcaggaacaggcaataccttccatattagaacacagagat
gtcttgggtacagcccagaccggaacaggaaaaacagcggctttcgccattcctattctt
caaaatcttacagaaagaaaagctccgaaaaataatttcatcaaagctttaattcttacg
ccaaccagagaacttgccattcagattgaagaaagtttcaatgcatacggcagaaattta
ccgttaagaaaactggtaatatttggtggagtaaaacaaggaaaccaagaagcagcactt
agaaaaggagtagatattttggttgccacacccggaagattattggattttgttgcgcag
ggaatcatcagcttaaaaaatctggaaatattcgttttggatgaggcagacagaatgctg
gatatgggttttgtacatgatgtaaaaagaattattaagcttttacctcagaaaagacaa
acacttttcttttctgctactatgcctacggaaattcaaaaacttgcagattctatcctg
aatactcctataaaagtttctgtaacacccatttcttctactgcagaaaccataaaacag
gcggtttattttgttgaaaaagaaaacaaactcgacctcctcactcatatattaaaaaat
aatatttcggattctgtacttgtttttgcccgaacaaaacatggttcggataaaattgcg
agaaagcttcagcaaagccagatcacggcagaggcaattcatggtaataaatcgcagaat
gcaagacaaaatgctttaaacaacttcaaatcgggcaaaacaagagtattggttgctaca
gatattgctgcaagaggtattgatattgatgagctgaaatatgtaattaattttgaattg
tctgatgttgccgaaacgtatgtgcaccgaattggacgaaccggtagagctggtgcaaaa
ggaagttcaatatcttttgtagacggattagatttgctgaatctaaaagataccgaaaaa
ctaatcggaatgaaaattcctgtagtaaaagaccatccataccatacagacgatttggtt
gtacaaaaaagagattctaataataaaccttttgtaccaaaaccgaaatcatcccatcca
actcaacagagaaaagatattggatttaaaaaaccgaaaaacaaaagcaatttttctcgc
aaaaagtaa

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