Chryseobacterium oryzae: MTP08_09240
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Entry
MTP08_09240 CDS
T08538
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
corz
Chryseobacterium oryzae
Brite
KEGG Orthology (KO) [BR:
corz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
corz03032
]
MTP08_09240
03036 Chromosome and associated proteins [BR:
corz03036
]
MTP08_09240
03400 DNA repair and recombination proteins [BR:
corz03400
]
MTP08_09240
DNA replication proteins [BR:
corz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MTP08_09240
Chromosome and associated proteins [BR:
corz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MTP08_09240
DNA repair and recombination proteins [BR:
corz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MTP08_09240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF4777
COMMD9_HN
DUF937
Motif
Other DBs
NCBI-ProteinID:
UOE37250
LinkDB
All DBs
Position
2011392..2011682
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AA seq
96 aa
AA seq
DB search
MTKAELVNTISNKLGTEKNETQKVVEAFMQEIRTSMYNGDNVYLRGFGSFIVKTRAAKTG
RNISKNTAIEIPAHNIPAFKPSKSFVEKVKTKVAVK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaggcagaattggtaaacaccatctcaaataaattggggaccgaaaagaatgaa
acacagaaagttgtagaagcttttatgcaggagataagaacttctatgtacaacggagat
aatgtttacttaagaggatttggatcattcatagtgaaaacaagagcagctaaaacggga
agaaacatctctaaaaatactgcaatagaaattcctgcacacaatattcctgctttcaaa
ccatcaaaatcttttgtggagaaagttaagacaaaagttgcagtaaaataa
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