Chryseobacterium oryzae: MTP08_09265
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Entry
MTP08_09265 CDS
T08538
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
corz
Chryseobacterium oryzae
Brite
KEGG Orthology (KO) [BR:
corz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
corz03032
]
MTP08_09265
03400 DNA repair and recombination proteins [BR:
corz03400
]
MTP08_09265
Enzymes [BR:
corz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MTP08_09265
DNA replication proteins [BR:
corz03032
]
Prokaryotic type
DNA Topoisomerases
MTP08_09265
DNA repair and recombination proteins [BR:
corz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MTP08_09265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UOE37255
LinkDB
All DBs
Position
2016382..2017485
Genome browser
AA seq
367 aa
AA seq
DB search
MENSDLEIISHLKPSKIIKIMKDPVASAKAVNLIYTSDAEASGIIRRKRGKKFQYFKNDE
KIKDKDEIKRINSLVIPPAWENVWICALDNGHLQATGFDVKKRKQYRYHPLWSALRNHTK
FYRMLQFGYALPEIRLQLEKDLALKNFEKRKILALIVSLMQRTNIRIGNNIYEKLYGSFG
LTTLKEKHVKVEGQKINFSFKGKKGVMHNVNLKSKRLAKLIMKCKEIPGKELFQYIDDEG
KRHSVDSGMVNDYIKELSGEDFTAKDFRTWSGTVNALIAFKEIGYAENNSQYKKKIKAAL
DIVAEHLGNTSTVCRKYYVHPLVINLYENNTIKKYLDELETIEENDGKAGLTHEEKLVLK
ILETEKM
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattctgatcttgaaattatttcgcacctaaaaccttccaagatcatcaaaatt
atgaaagatccggtggcttctgcaaaagcggtaaatttaatttatacgtcggatgcagaa
gcttccggcattattcgccgaaaaagaggaaaaaaatttcaatattttaaaaacgatgag
aagattaaggataaagatgaaattaaacgcatcaacagtttggtaattcctcccgcttgg
gaaaatgtatggatttgtgcattagataacgggcatcttcaggcaacaggttttgatgta
aaaaaaagaaagcaataccgttatcatcctttatggagtgctctcagaaaccataccaaa
ttttacagaatgcttcagtttgggtatgctttgcctgaaatccgtttacagcttgaaaaa
gatttagccttaaaaaattttgaaaaaaggaaaattttagccttaattgtaagtttgatg
cagcgtacaaatatccgtattggaaacaatatttacgaaaaactttacggatcttttgga
ctgactactcttaaagaaaaacatgtaaaagtagaggggcaaaagatcaatttttctttc
aaaggtaaaaaaggggtaatgcacaacgttaatctgaaaagtaagaggttggcaaaactc
atcatgaaatgtaaagaaatcccgggaaaagagctttttcagtatattgatgatgaagga
aaaaggcattctgtagattccggaatggtaaatgactatataaaagaactgagtggtgaa
gatttcacagctaaagacttcagaacatggtcgggaaccgtaaatgctttaattgctttt
aaagaaatcggctatgccgaaaataattctcagtataaaaagaaaataaaagcagctctg
gatattgtggcagaacatttgggaaacaccagtaccgtgtgcagaaaatactatgtacac
ccattagtcattaacctttatgaaaataataccataaaaaaatacctggacgagctggaa
actattgaagaaaatgacggaaaagcaggattaactcacgaagaaaagcttgttttaaaa
attcttgaaacagagaaaatgtaa
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