KEGG   Lodderomyces orthopsilosis: CORT_0A00940
Entry
CORT_0A00940      CDS       T02488                                 
Name
(RefSeq) Prp40 protein
  KO
K12821  pre-mRNA-processing factor 40
Organism
cot  Lodderomyces orthopsilosis
Pathway
cot03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cot00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CORT_0A00940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cot03041]
    CORT_0A00940
Spliceosome [BR:cot03041]
 Complex A
  U1 snRNP components
   U1 related factors
    CORT_0A00940
 Complex B
    CORT_0A00940
SSDB
Motif
Pfam: FF WW WW_TCERG1 CEP164_N Glyco_hyd_101C Choline_bind_3 R3H_PUS7L
Other DBs
NCBI-GeneID: 14537342
NCBI-ProteinID: XP_003865926
UniProt: H8WVL2
LinkDB
Position
1:208222..209748
AA seq 508 aa
MSLINIPHFIMSVWEQLKTEEGQTYYYNKETSETSWTLPEGEEASVVTSGWQEYITDDGK
TYYYNESTGETTWDKPEELEVDVTSNEKEEEEEEEDAIDQALKHQPVELPTSMSSTDISE
EDEQAFIQFLKDKNVDSTWSFQTVMQKLVSKPEYWSVHNPIKRKSLYEKYLVQRFEDEIK
NKTDVIERFKINFIKELEKLRNEGELDYRTRWISLRKKFVEEENPIFKHSMLPDLDLAKM
FYKYTAELKKEHEYEDQKLKHQATDELYNYLHSINNALVQKTSNFQELYANLIEDPRFKQ
NKHFRHLKELDILNLYEFKLYPELVEGLKKQIKIQEKVNYRSDRKARQNYRSLLATLTLD
AKTKFSDIFSTIENEDAFIELCGRNGSSPLELFWDIIDEKKQEMKLRKDLVEAVINDLQK
KGELGQSIWATKDSFVDKLKQVKDDRLLQFNLKEERTNNEIFDIYQTLKDERELKERIIK
KRGISEIDIGSAAGPAKKMKKQVKKMNY
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgctgttgatcaatattccacactttatcatgtctgtttgggagcaattgaagacagaa
gagggacaaacatactactataataaagagacactggaaacaagctggaccttaccagag
ggggaagaagccagtgttgttacctcaggttggcaagagtacatcacagatgatgggaaa
acgtattattacaatgagtcaacaggggaaactacttgggataagccagaagagttagaa
gtggatgtcacactgaatgaaaaagaggaagaagaagaagaagaagatgcgattgaccaa
gctctcaagcatcaaccagtagaactacctactagtatgagttctaccgatatttcggaa
gaggatgaacaggcgtttattcagtttttgaaggacaaaaatgtcgactcgacctggtct
tttcaaacagttatgcagaaattggttagcaagcctgaatattggtccgttcacaaccca
atcaaaagaaagtccttatacgagaagtaccttgttcaaagatttgaagatgaaatcaaa
aacaagacagatgtaattgagcggtttaagataaattttatcaaagaattggaaaagttg
agaaatgagggtgaacttgattatagaactagatggataagtctacgaaaaaaattcgtg
gaggaagagaaccccattttcaagcattcaatgttgccggatctagatttggccaagatg
ttttacaagtacacagctgagttgaaaaaagaacacgaatatgaagatcagaaactaaag
catcaagcaaccgatgagctctacaattatctccacctgatcaacaatgcattagttcag
aaaacatctaattttcaagagctttacgctaatttaatagaagacccgcgtttcaaacaa
aataaacacttcagacacttgaaggaattggatatactaaatttatacgaatttaaactt
taccctgaattggtagagggtctaaagaagcaaataaagatacaagaaaaggtgaattat
cgaagtgatcgcaaagcacgccaaaattaccgatccttactagctacactaaccttggat
gcgaagaccaaattcagcgatattttcagcactatagaaaatgaagatgcgttcatcgag
ttgtgtggcagaaacggatcatcaccattagagttgttctgggacattattgatgaaaag
aaacaggagatgaagctacgaaaggatttagtcgaagcagtgatcaatgatttgcaaaaa
aaaggagaacttggccagagtatatgggccaccaaggattcattcgtggataagctcaag
caggttaaagacgatagattactacagtttaatttgaaggaggaaagaactaacaatgaa
atttttgatatataccaaacattgaaagatgaacgtgaattgaaggagagaataatcaaa
aagagaggtatttcggaaattgatataggttctgctgccggcccagcaaagaagatgaag
aaacaggtgaaaaagatgaactattga

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