Candida orthopsilosis: CORT_0A01240
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Entry
CORT_0A01240 CDS
T02488
Name
(RefSeq) Rrp9 protein
KO
K14793
ribosomal RNA-processing protein 9
Organism
cot
Candida orthopsilosis
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cot03009
]
CORT_0A01240
Ribosome biogenesis [BR:
cot03009
]
Eukaryotic type
90S particles
Other 90S particles
CORT_0A01240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
WDR55
NBCH_WD40
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_IFT122_1st
Beta-prop_DCAF12
WD40_Gbeta
Beta-prop_HPS5
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IP5PC_F
WD40_MABP1-WDR62_1st
WDR93
PHTB1_N
Motif
Other DBs
NCBI-GeneID:
14536782
NCBI-ProteinID:
XP_003865956
UniProt:
H8WVP2
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All DBs
Position
1:271741..273330
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AA seq
529 aa
AA seq
DB search
MAGDPFLSDPSKKRKRSDKITSTTRSKKSKSSTPQPSSATSNFDEEISSASDTENERSLE
DQRQEEELSSDEEFATESAADKRRRLAKQYLENLKNEELRDSDNFDAQDLDDEILAKRLQ
VDVADAKGHVYKFWGDKISQQLDGDDVKLVTTRIGSNNVTSMCVHFPYLYTVSKDIEIIK
WNISSGKKPQRIKHTKGGAKYFTLNTSRPGLNHHWEQINCIAASPDGKYIVTGGSDSRLI
IWSSENLACLKVLPTRSAVNSIVFRRNTDQLFAACADLRIRTYSINQFTQLETLYGHQDN
ITDIAALARETCVSVGSRDKTAMFWKIPEESRLTFRGGDSIEKKRKKRSDDDETGSDEPF
HNEGSIDVVSMIDESHFVTGSDNGNIALWSLAKKKAQDTRRLAHGLQPQFQPQQASAETE
TEIASRQIPVPQPYWITAIHAPAYSDVFLSGSFGGTMKIWRLDATLRSFTLIGEVENLRG
FVVKIDSVEIPNTKQLRVFVLVSKEHKFGRWFGKVPGGRNALISFTFNI
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagacccattcctatctgatccttcaaagaagagaaagcgtctggataagatt
acaagcacaacacgatccaagaagtctaaatcatccactccacagccatcgtccgcgaca
tcaaatttcgatgaagagatatcaagtgccagtgacactgaaaacgaacggtctttagaa
gaccaacgacaagaggaagaactttcatcagatgaagaatttgccactgaaagtgcagct
gacaaaagaagaagattagctaaacagtatcttgaaaacttgaagaatgaggaactacgc
gattctgataattttgatgcccaggatcttgacgacgaaattttagcaaaaagattgcaa
gtcgatgtagctgatgctaaaggacatgtatataagttttggggtgataaaatttcacaa
caattggatggagacgatgttaaattagtaacgacacggataggatcaaataacgttact
agcatgtgcgtgcatttcccatacctatatacggtatcaaaagatatcgaaataatcaag
tggaatattagtctgggaaagaagccccagaggataaagcataccaaaggtggagccaag
tactttacattaaatacatcacgccccggtttgaatcatcactgggagcagataaactgt
attgcagcatctccagatgggaaatacatcgtcacaggcggttccgattcccgattaata
atttggtcaagtgaaaatttggcttgtttaaaggtactcccaaccagatcagcagtgaac
tcaattgtatttagaagaaacactgatcagttattcgctgcatgcgctgatttgagaata
agaacatattcgataaatcaatttactcaattggaaacattatatggtcatcaagataat
atcactgacattgccgctttagctagagagacttgtgtttctgttggaagtagagataaa
actgccatgttttggaaaattcctgaagaatcgaggttaacttttcgtggtggtgattca
atagaaaagaagaggaaaaagagatccgatgatgatgaaacaggaagtgatgaaccattc
cacaatgaaggatcgattgatgttgtatccatgattgacgaatctcattttgtaactggc
tcagataatggaaatattgccctttggtcattagctaagaagaaagcacaggatactaga
agattggcacatggattgcagccacaatttcaaccacaacaagcaagtgctgaaactgaa
actgaaatagccagtcggcaaataccggttccacagccttactggattactgctatacat
gcaccagcgtacagtgatgtatttttaagtggttcatttggtggtaccatgaaaatttgg
agattagacgctactttgagatcatttaccttaataggtgaagtggaaaatttacgagga
tttgttgtcaaaatagatagtgttgaaatcccaaataccaaacaattgagggtgtttgtt
ttggtcagcaaagagcacaagtttggaagatggttcggtaaagtacctggtggaaggaat
gcattaattagttttacgtttaatatataa
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