Lodderomyces orthopsilosis: CORT_0A02810
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Entry
CORT_0A02810 CDS
T02488
Name
(RefSeq) Cdc4 F-box subunit of SCF(CDC4) ubiquitin ligase
KO
K03361
F-box and WD-40 domain protein CDC4
Organism
cot
Lodderomyces orthopsilosis
Pathway
cot04111
Cell cycle - yeast
cot04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CORT_0A02810
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
CORT_0A02810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cot04121
]
CORT_0A02810
Ubiquitin system [BR:
cot04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
CORT_0A02810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_Gbeta
EIF3I
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
CDC4_D
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR41
Beta-prop_SCAP
WDR55
Beta-prop_WDR36-Utp21_1st
F-box-like
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_WDR75_1st
F-box
NBCH_WD40
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_ACSF4
Beta-prop_LRRK2
TRM82_WD
Beta-prop_DCAF12
PRANC
F-box_COS111
F-box_4
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
14537571
NCBI-ProteinID:
XP_003866111
UniProt:
H8WW47
LinkDB
All DBs
Position
1:615674..618112
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AA seq
812 aa
AA seq
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MDSEKVSDFVYPLIDKPARFEYKLVNQNGKLAEVPLHKEYQRLSLFEVGHNYRQRGHSTE
HSESRNHTITDNSRENSRKRNAGDDDSVERDSMVSCDDITSSDTDSNTQASASSRMHSYR
TNGLVHPPTKKRLTSGYDSTSSANFQVDSPGSMSMAVAPSGNNNISTIDLSDTVRESHGH
VQSAVQTGYNTNTSEVNNNNTNQNTTPLRDQLRRPKTPNTINSPSQTPISDIEEDPIQQL
PLPSPSASPIQSDHENDEDGSSETPRGMGRRLNLEMIENHMATVPGTQAELINTIDQLSQ
FLTPQNKNHLIFRLLQKTHRSSLSTFNGLLNDSLKRDLIGNLPVEISMKVLSYLDAETLL
SISKVCKKWFKLINNTALWTDLLKRDKLITEDAVIKYELNEPKDMIDEWCTLPGEINSAQ
VLYKKRRMIVNRWLDPKYKPKRISVKGHGNKVVTCLQHDEEKIVTGVDDKYILIYSTQTG
QLMKVLEGHDGGVWAMKYYGNTLVTGSTDRSVRIWNMATGKCTHVFRGHTSTIRCLDIIT
PSVIGKDAHGEDIVFPEHPLLITGSRDHNIHVWRLPILQEDAVDEVTFDSGESENPYLIA
VLTGHTQSVRSLSGYGNIIISGSYDSTVRVWDLLDNGRCKHILQGHQDRVYSTAIDFNKK
VCFSGSMDSTINIWNFETGEFLKVLEGHSSLVGLLALVDGVLVSAAADASLRIWDPVTGE
LRSKLRGHAAAITCFEHDGLKVVSGSEKMLKLWDAQRGEFARNLLDDVTGGIWQVRIDYK
RCVAAVQRVNSADEGETFIEILDFSEVPSFKS
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggactctgaaaaagtttctgattttgtttaccccctcatagataagcctgctaggttt
gagtacaaactagtcaaccaaaacggaaagttagctgaggtaccgctccataaggaatat
caaagactatcattattcgaggtagggcataattatcgtcaacgaggtcattctacggaa
cattccgaatcacgcaaccatactatcactgacaactcacgagaaaactcacgcaagaga
aatgcgggtgacgatgattctgtggaacgtgatagcatggtatcttgtgatgacatcact
tcttcggataccgattccaacacccaagcgtcagccctgtcacgtatgcactcttaccga
acaaatggcctcgtgcatccaccaaccaaaaagagattgacatcgggttatgatctgaca
agctcagcaaactttcaggtggattctccaggtagtatgtctatggcagtagctcctagt
ggaaacaataacatcagcacgatcgatctaagtgacactgtgcgagagagtcatggacat
gtacagagtgccgttcagaccggttacaacaccaatacatctgaagtgaataataataat
actaatcaaaacactacacctttacgcgatcaactacgtcgtccaaaaacaccaaataca
atcaattcgcccagccaaactccaatttcggatatcgaagaggaccccatccagcagcta
ccactaccctcgccaagtgcgtcacctattcaactggatcacgaaaacgatgaggatgga
tcttctgaaacccctagaggaatgggacgaaggttaaatttagaaatgattgagaatcac
atggcaactgtgccagggacgcaagcagagttgattaacacgattgaccagttatcccag
ttccttaccccacaaaacaaaaaccatttgattttccggttgttgcaaaagactcaccga
tcgtcattgagcacttttaatgggttgctaaatgattccttgaaacgtgacttgattgga
aatttgccagttgagatttcaatgaaggttttatcttaccttgatgctgaaacacttctt
tcgatatcaaaagtgtgcaaaaagtggtttaaacttatcaataatactgctttgtggact
gacttgctcaagagagacaaacttataaccgaagatgcagttatcaagtatgaattgaac
gagcctaaagatatgattgatgaatggtgcactcttcctggcgagataaattctgctcag
gtgttgtacaagaaacgaagaatgattgtcaatagatggttggaccccaaatacaagcca
aagagaatcagtgtcaaggggcatggcaataaagttgttacgtgtcttcaacatgatgaa
gaaaagattgtcactggtgtggacgacaaatatatcctcatctatagtactcaaacaggg
caattgatgaaagttttggaaggacatgatggcggagtatgggccatgaagtattatgga
aacactttggtgactggatcgactgataggtcagttcgaatttggaacatggccactgga
aagtgtacgcatgtgttccgtggccatacttccaccataagatgtttagatatcattacg
ccttcagtaattggaaaggatgctcatggtgaggatattgtcttccccgagcatccatta
ttgattaccgggtctcgtgatcacaatatacatgtctggagactacctattcttcaagag
gatgcagttgatgaagtcacatttgatagtggagaaagtgaaaacccttacttgatagct
gttcttactggccatactcagtctgtgcgttctttatcgggatatggaaatataatcatt
tctggttcatacgactcaaccgttcgagtgtgggatttgcttgataatggaaggtgcaag
catattttgcagggccatcaagatagggtatattcaaccgcgatagatttcaataaaaaa
gtttgtttttctgggtccatggattcgactataaatatatggaattttgaaaccggtgag
tttttgaaggtgttggaaggacattcgtctttggtgggtctacttgctttggtggacggt
gtgttagtatctgctgctgctgacgcatctctccgaatttgggatcctgtcaccggtgaa
ttgagaagtaaattgagaggtcatgccgcagccatcacgtgctttgagcacgacggattg
aaagtagttagtggaagcgagaaaatgctcaaattatgggacgctcaacgaggagaattt
gctagaaatttattagatgatgttacgggtggtatttggcaagtgagaatcgattataag
agatgtgttgctgctgtgcaaagagtcaacagtgctgatgaaggtgaaacgtttattgaa
attttagactttagtgaggtcccaagtttcaaaagttga
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