Candida orthopsilosis: CORT_0A04280
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Entry
CORT_0A04280 CDS
T02488
Name
(RefSeq) Cdc48 microsomal ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cot
Candida orthopsilosis
Pathway
cot04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CORT_0A04280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cot03019
]
CORT_0A04280
03009 Ribosome biogenesis [BR:
cot03009
]
CORT_0A04280
04131 Membrane trafficking [BR:
cot04131
]
CORT_0A04280
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cot04147
]
CORT_0A04280
Messenger RNA biogenesis [BR:
cot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
CORT_0A04280
Ribosome biogenesis [BR:
cot03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
CORT_0A04280
Membrane trafficking [BR:
cot04131
]
SNARE
SNARE associated proteins
Others
CORT_0A04280
Autophagy
Aggrephagy
Other aggrephagy associated proteins
CORT_0A04280
Exosome [BR:
cot04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CORT_0A04280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_2
CDC48_2
AAA_16
AAA_5
AAA_33
TIP49
AAA_22
AAA_14
RNA_helicase
nSTAND3
Mg_chelatase
AAA_28
AAA_17
IstB_IS21
ATPase
Parvo_NS1
AAA_7
NPHP3_N
Vps4_C
AAA_18
ResIII
ABC_tran
AAA_24
Sigma54_activat
PhoH
DUF815
Zeta_toxin
AAA_lid_PRS2_C
KAP_NTPase
UFD1_N2
Zot
Motif
Other DBs
NCBI-GeneID:
14536837
NCBI-ProteinID:
XP_003866256
UniProt:
H8WWJ2
LinkDB
All DBs
Position
1:920234..922669
Genome browser
AA seq
811 aa
AA seq
DB search
MTGEEDKKQHFDASGASAVDDKTATAILRRKKKDNALVVDDATNDDNSVITMSSNTMELL
QLFRGDTVLVKGKKRKDTVLIVLADDDMDDGVARINRCVRNNLRVRLGDIITVHPCPDIK
YANRISVLPIADTIEGITGSLFDLYLKPYFVEAYRPVRKGDYFTVRGGMRQVEFKVVEVD
PEEIAIVAQDTIIHCEGEPINREDEENNMNEVGYDDIGGCKKQMAQIRELVELPLRHPQL
FKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKA
FEEAEKNSPSIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNR
PNSIDPALRRFGRFDREVDIGVPDAEGRMEILRIHTKNMKLADDVDLEAIASETHGFVGA
DIASLCSEAAMQQIREKMDLIDLEEETIDADVLNSLGVTQENFRFALGNSNPSALRETVV
ENVNVTWDDIGGLDNIKNELKETVEYPVLHPEQYQKFGLAPTKGVLFFGPPGTGKTLLAK
AVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKSRGGS
NGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPD
EAARLSILNAQLRNTPLEPGLDLNEIAKITHGFSGADLSYIVQRAAKFAIKDSIEAQVKA
NKEKGEDVEMKGDGVAVEEEADPVPYITTSHFEEAMKTAKRSVSDAELRRYEAYASQLMA
SRGQFTNFKFNQGGAAFGEEQQNQEEDDLYS
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgacaggagaggaagataagaaacaacactttgatgcctctggagcatccgctgttgat
gataaaacagctacagctattttaagaagaaagaaaaaagataacgccttggtcgttgat
gatgcaacaaacgatgacaattcagttattaccatgtcatccaatacaatggagttgttg
caattgtttcgtggtgatacagtcttggttaagggtaaaaagagaaaggatacagtattg
attgttcttgcggatgacgacatggacgatggcgttgcaagaatcaatcgttgtgtgcgt
aacaacttgcgcgtcagactaggtgatatcattactgttcatccatgccctgatatcaag
tatgcaaatagaatctcagtcttgccaattgctgacaccattgaaggtattacaggatcg
ttgtttgatctctatttgaagccatatttcgtcgaggcttatagaccagttagaaaaggt
gattatttcacggtaaggggtggtatgagacaagttgagtttaaggttgtcgaagttgat
ccagaagagattgccattgtggctcaggataccattatccattgtgaaggagaacctatt
aatcgtgaagatgaggaaaacaacatgaacgaagtcggctacgatgatattggtggatgt
aaaaaacaaatggcacagattagagagttggttgagttgccattgagacacccacagtta
ttcaagtccattggtattaaaccaccaaaaggtattttgatgtatggtcctccgggtact
ggtaaaacaatcatggccagagctgtggccaatgaaaccggtgctttctttttcttaata
aatggtcctgaaatcatgtccaaaatggctggtgaatccgaatcgaacttgagaaaggca
tttgaagaggctgaaaagaattctccatccatcatctttatcgatgaaatcgactctatt
gcaccaaagagagacaaaactaatggtgaagttgaaagaagagttgtttcgcaattgttg
actctcatggatggtatgaaggccagatctaatgttgttgttattgccgccaccaataga
cccaactccattgaccccgctttgagaagatttggtagatttgatagagaagtggacatt
ggagttccagatgccgaaggtcgtatggagattttaagaatccacacaaagaatatgaaa
ttagctgatgacgttgatttggaagcaattgcgtcggaaactcatggttttgttggtgcc
gatatagcatccttgtgttctgaagcagctatgcaacaaattcgtgaaaagatggatctc
atcgatttggaagaggaaaccattgatgccgacgtgttgaactcacttggtgttactcaa
gaaaactttaggtttgctctcggtaactccaacccatcggcattgcgtgaaactgttgtt
gaaaatgtcaatgttacctgggacgacattggtggattggataacatcaagaacgaattg
aaggaaactgttgagtaccctgttttgcacccagaacaatatcaaaagtttggtttggct
cctaccaagggtgttttattttttggcccaccgggtacaggtaagacgttgttggccaaa
gcagttgctaccgaagtttctgccaactttattagtgttaaaggtcctgaattgttgagt
atgtggtacggtgagtcagaatccaatattcgtgatattttcgacaaagcaagagctgct
gctcctactgttgtgtttttggatgaattggattccattgctaaatctagaggtggttca
aacggtgatgcgggtggtgcttcagacagagttgttaaccaattgttgacagaaatggat
ggtatgaatgccaagaagaatgtctttgttatcggtgctaccaacagacctgatcaaatt
gatcctgctttgttgaggccaggtagattggatcaattgatctatgttccattaccagat
gaggcagctagactctccatcttgaatgctcaattgagaaatacaccattagaaccagga
ttggacttgaacgaaattgccaagattactcatggtttctcgggtgctgatttgagctac
attgtacaaagagctgccaagtttgccatcaaggattcgatcgaagctcaagtcaaagct
aacaaggagaagggcgaagacgttgaaatgaagggtgacggtgtagcagttgaagaagag
gctgacccagttccatacatcaccacctctcactttgaagaggcaatgaagacagctaag
agatctgtttctgatgcggaactacgccgttatgaagcatacgccctgcagttgatggct
tcaagaggccagtttaccaacttcaaattcaaccaaggtggtgctgcatttggcgaggaa
caacaaaatcaagaagaagatgatttgtacagttag
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