Lodderomyces orthopsilosis: CORT_0A04930
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Entry
CORT_0A04930 CDS
T02488
Name
(RefSeq) hypothetical protein
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
cot
Lodderomyces orthopsilosis
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cot03009
]
CORT_0A04930
Ribosome biogenesis [BR:
cot03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CORT_0A04930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BING4CT
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR5
WD40_WDHD1_1st
WD40
WDR55
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_NOL10_N
ASA1
Beta-prop_TEP1_2nd
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
WDR54
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
14537357
NCBI-ProteinID:
XP_003866321
UniProt:
H8WXT4
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All DBs
Position
1:1070076..1071647
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AA seq
523 aa
AA seq
DB search
MSEPKSDNKHSKGQVKSSKSQRKHRYSKDKKLNSKLQRIENQYKDALKSAAGTDYLLQEE
TGFLEAEGPMERTFKFKQDEITKAVDANTANKKFELKLPEFGPYSIDFSRNGRELLLGGK
KGHVASIDWKSGLLGCELHLNETVNAVKCLHNDQYFAVAQKKYTFIYDKEGTELHRLKQH
VEATLLDFLPYHFLLVTAGHTGFLKYHDVSTGELVSEIRTKLGPTLAMKHNPYNAVIHSG
HGNGQVTLWSPNAPEPLVKIQSARGPIRDLAIDREGKYMAVSGADKTLKIWDVRTFKEVD
QYYTQTPATSLDISDTGLLSVGWGSHVTIWKNIFKTSHQADPYMNHLIPGSKVDKVKFVP
FEDILGIGHQQGYDSIIVPGAGEANYDALELNPFETTKQRQEQEVRSLLNKLPADSIALD
PNTIGTIDKRAKSIKLKPGEINELGDFANDASDKMAIKPDVKGKNSALRKHLRRKRENVI
DQRKMRIEKNLRNEKEARLRRLKMLQGEEEEKDVLDSALARFK
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagccaaaaagtgacaacaaacacctgaagggtcaagtcaaaagcctgaaaagc
caaagaaaacatagatactccaaagacaagaaactcaactccaaattacaaaggatagaa
aaccaatacaaggatgcattaaaatctgctgcaggtaccgattatcttttacaagaggag
acagggtttttggaagcagaaggccctatggaaagaactttcaaattcaagcaagatgaa
ataacaaaggcagtggatgcaaacactgcaaataaaaaatttgaacttaaacttcccgaa
tttggtccatatctgattgatttttcaagaaatggtcgtgaacttcttcttggaggaaaa
aagggacacgttgcgtctattgattggaagtctggtttattgggatgtgaattgcacctt
aatgagacagttaatgccgtgaagtgtttgcacaatgatcaatactttgccgtagcacaa
aagaaatacacttttatctatgacaaggaaggtacagaacttcatcgactcaagcagcat
gtggaggctaccctattggactttttgccgtatcattttcttttagtgacagctggacac
acaggtttcctaaaataccatgatgtttccacaggtgagttggttagtgagataagaaca
aaacttggtcccactttagcaatgaaacataatccatacaatgctgttattcacctgggc
catggaaatggtcaagtaacattgtggtctccaaatgcacctgaaccgttagtcaaaata
caatctgctcgtggcccaattcgagatttggccattgatagagagggtaaatatatggca
gtcagcggagccgacaagacgttgaaaatatgggatgtacgaactttcaaagaagtggat
caatattacacacaaacgccggctacatcattagatatttccgacaccggattactctct
gtcggttggggttcacatgtaactatatggaaaaacatttttaaaacatcacatcaggct
gatccatatatgaaccatttgatccctggatcgaaagtggacaaggtcaagtttgttcca
ttcgaagatattctaggcattggtcaccagcaagggtatgactcaattatagttccaggt
gctggtgaagccaattatgatgcattagaattgaacccatttgaaactactaaacaaaga
caggaacaagaagtcaggtctttgcttaataaacttcccgctgattctattgcgttggac
ccaaacactattggaactattgataaaagagcaaaatcaataaaattgaaacctggagag
attaatgaattgggtgattttgctaatgatgcatcagacaagatggctataaaaccggat
gtcaagggtaaaaattctgctttgagaaaacatttgaggagaaagagagaaaatgtcatt
gatcaaagaaagatgaggattgaaaagaatttgagaaatgaaaaggaggcaaggttgaga
cgtttgaagatgctacaaggggaagaagaggaaaaggatgttttagactctgcattagct
aggtttaagtaa
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