Candida orthopsilosis: CORT_0A05730
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Entry
CORT_0A05730 CDS
T02488
Name
(RefSeq) hypothetical protein
KO
K14792
rRNA biogenesis protein RRP5
Organism
cot
Candida orthopsilosis
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cot03009
]
CORT_0A05730
Ribosome biogenesis [BR:
cot03009
]
Eukaryotic type
90S particles
Other 90S particles
CORT_0A05730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
Spt6_S1
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_19
TPR_14
HAT_Syf1_CNRKL1_C
Suf
TPR_12
TPR_CcmH_CycH
BUD22
DUF7017
Nop14
TPR_21
ANAPC3
Motif
Other DBs
NCBI-GeneID:
14537057
NCBI-ProteinID:
XP_003866400
UniProt:
H8WY13
LinkDB
All DBs
Position
1:1264458..1269575
Genome browser
AA seq
1705 aa
AA seq
DB search
MSDATDSKLSSNEYAFPRGGATGLTPLEVKEISNEATKDVLFEVASQKKRTKNTTDSENP
KKKQRTSKKKGSKSESLKDGDDEDEKKTQIEYLSFKNLVPGSFVFGQIQAINKLDIVLAL
GNNLVGYVPITAISSHVIDLIKKYEEESEEEEEDEEDYDDNGTLINSKPEKVFPDLKSIF
QIGSWLKAKVVETETSNKKRIEMSIEPEIVNAHLEKEDIVSGNILSCSVKSIEDHGLILE
SGIEGLSAFVSNKELKNAEIEPSTCAQGLVFTTTVVSKPSGRIITVKPAVPSTTKKLTPI
TTISSVDAIQVGAIVDALVSDVTDSGIGARVFGLVDGTINFSDVQIFSVEELKHKFAIGS
NVKARIMAILQKGGVRKLVLSLVSHSLQMGDGTSRTEALEAFPVGHVFDVVEVLGSDQEY
IFVKLGLSTFGQIHNSNIDDSKTLIDYSVSSKHKARVIAYNMVDNLYVLTFKPSTIEAPY
LSVRDIPVGTLLPNCEITKVLPDSGGIQVKLLDDFQGFIPSNHMSDIKLVYPERKFRIGS
KVKGRLLSHKGKTPLVTVRKSLVNLEDDDILSNFEDAKIGMKTNATVEKFVHGGVIVSFF
GSLRAFLPKTEISETFVDDASKYLKLGQVVNVKILDINEDQKRLVVTLKQSSQLSTSQKT
EIANLIPGISVVQAVVVEKKNDSVLIELEGSNLRGVVHDGQLSDGNYEQNRALFKKTEIN
SKLEVLILEKDFKARTVIATAKKSLIEASKRKQLPTDFDDVQPNKIIKGYVKSVTNLGLF
VCFTGRLTGLILAKYVSKTAHEDLSRRFYKYQSLACRVLSVDTENKRFLLTIADSNDTEG
DNLTNPVDSTKKTVEDYAPGVVTKAIIKSVKGTQLNVRLADNLNGRVDVTQCFKSIKDIK
NLSQPLSGFHKGDELNVKVIGVHDAKNHTFLPITHNKANKQTIIELSLQDAKVNRKHLSA
LKLADVKKGDELVAFVNNVDRGFVWVSITPSIKGRVSFMDLSDDGTIFHNFDNRYPIGAA
VQVKVKEVDNEHQTLALTSREHYIRSFDDVKKGKTYPARIIKVKDSYVLVDLGGKVIASS
FITDALNNYSDKLDHGFHVNEYVGAKVLDIDADQQKISVSLRDEDSTDRTIDSFEDLSRG
DIVKGFVKNVSTNGVYVSLGRSVFALVRVSDLSDSYLKDWKKFFKPNQSVTGKIINCKEE
GRILMTLKESEVNGELKTMKTFDDLAVGDIFEGHVTKTTDFGVFVKLDGTVNISGLCHHS
EISENDVKNVMALFGEGDRVKVKILKIDPSKKQLSLGMKASYFDDTHEEVDDDVEMEIAE
EDEEEDDETSGESENEDVIIDAEEESDDDDNEEEEEGEEAETSTTESNALSTNGFDWTAS
ILDQTEDHDSSSDDEDFMSNSKSSRPRKSRKQTRVEDKTIDLNTRAPQSVADFERLLIGN
PNSSILWMNYMSFNLQLSEVDKARQIGERALETINYREEQEKMNIWIALLNLENTFGTDE
SLDAVFKKACQYMDSFIIHQKLASILIMSEKYDQARELFKAMGKKFGQNVLTWVLYGSFL
LDQDLNNEARQVLARALQVLPKRDHIEVVRKFAQLEYAKGDVEQARSLFEGLVADAPKRI
DLWNVYIDQEIKYGNGGDGDDDNKDSSNKQQIESLFERVIENKKVSRKQAKFFFNKWLAY
EEGQGDEKMVGKVKAKAIEYVRENE
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgctactgactcgaagctaagtagcaatgagtatgcttttcctagaggagga
gctactggattgactccgctagaagtgaaggagatttcaaatgaagcaaccaaagatgta
ttgtttgaggtagcgagtcagaagaagagaaccaagaatacaaccgattcagaaaatcct
aaaaagaagcaacgcactagtaaaaagaaaggatcaaaatcggaactgttaaaggatggc
gatgatgaggacgagaagaaaacacaaattgagtacttgtcatttaagaatctagttccc
gggtcgtttgtgtttggacaaattcaagcgataaataagttagatattgtgttggcattg
ggaaataacttggttgggtatgtgccaatcactgcgattagctcgcacgttattgattta
atcaaaaagtatgaggaggaaagtgaagaagaagaagaagacgaggaagactatgatgac
aacggtacgctcataaactcaaagcctgagaaggtatttcctgacttgaagtctattttc
caaattggctcatggttgaaagcaaaagtagttgaaactgaaacttcaaacaagaagaga
atagagatgagcattgaaccagaaattgttaatgctcacctagaaaaggaagacatagtt
tcgggaaacatcttgctgtgttcagtcaagtccattgaagatcatggtttgatattggaa
agtggcattgagggtctttctgcgtttgtttcaaacaaggagctcaaaaatgcagaaata
gaacctagtacttgtgcacaaggattggtattcaccacaacagttgtatccaagccttcg
ggaagaatcattactgttaagcccgctgttccatctactacaaaaaagcttactccaatc
accacaatctcatccgttgatgccatacaagttggtgctatcgtagacgccctcgtgagt
gatgtaactgactctggtattggcgcaagagtatttggacttgttgatggtacgattaat
ttctccgatgttcaaatctttagtgtggaggagttgaaacacaaatttgccattggaagc
aatgtcaaggctagaatcatggcaattttgcaaaaaggtggtgtccggaagttagttctt
tcattggttctgcactcgttgcagatgggcgatggaacttcaagaactgaagctcttgag
gcttttcccgtggggcatgtttttgatgttgtggaagtgctcggttctgaccaagaatac
atttttgttaagcttggattatccacattcggtcaaatccacaattcaaatattgacgat
tcaaaaacattgattgactacagcgtctccagtaagcacaaagcgagagttattgcgtat
aacatggttgacaatttgtacgttttgacatttaaaccttcaactattgaagcaccttat
ttgagtgtaagagatatacccgttggaacccttctacccaattgtgaaatcacgaaagtt
ttgccagattcaggaggtattcaagtcaagcttttggatgatttccaaggattcattccc
tcaaatcacatgtcggatataaaactagtgtaccctgaaaggaaatttagaattggctct
aaagttaagggtcgtcttttatcccacaaagggaagactccattggtcacggtaagaaag
tcgttagtaaatttagaagatgatgacatactctcaaactttgaggatgcaaagatcggc
atgaagacaaacgccactgttgagaaatttgtccatggaggtgttatagtatcctttttt
ggatcacttcgtgcattcttacctaaaactgagatctcagaaacttttgtcgatgatgca
tccaagtacttgaaacttggccaggtggttaatgtcaagattttagatatcaacgaagat
caaaagcgtttggtggtaactttaaaacaatcaagtcagttgtcgacatcacaaaagact
gagattgctaacttgattcctggaatttctgttgttcaagctgttgtcgttgaaaagaag
aatgactcggtattgatcgagttagaaggctcgaatcttagaggagtggttcacgatggt
caactcagtgatggaaactatgaacaaaatagagcattatttaaaaagactgagatcaac
tctaaattggaagttttgattttggagaaggattttaaagcacgaactgttatcgccact
gccaaaaagtctcttattgaagcatcgaaaaggaaacaattgcccaccgatttcgatgat
gtccaaccaaataaaatcattaaaggttacgtcaagtctgtcacaaatctaggactattt
gtttgttttactgggagactaacagggttgattttggccaaatatgtctccaagactgcc
catgaagatttgtcaagaaggttttacaaatatcaatccttggcatgccgcgttttgagt
gttgatactgagaataagagattcttgttgactattgccgatagtaacgatactgagggg
gacaatttgaccaacccagttgattcaacgaaaaagactgtcgaggactatgctcctggt
gttgttactaaagcaattattaagtcggttaaaggtactcagttgaatgttagattagca
gacaatttgaatggtcgagttgatgtaacccagtgcttcaaatccataaaagatattaaa
aacttgtcgcaaccattgtctggatttcacaaaggtgacgagctcaatgtgaaggttatt
ggtgttcacgatgccaagaatcatacatttctaccaatcactcacaataaagccaataag
caaacaattatagagttgtccttacaagacgcaaaagttaatagaaagcatttgagtgcc
ttgaaacttgctgatgtgaagaaaggagatgaattggttgcatttgtaaataatgttgac
cgtgggtttgtttgggtgtcgattaccccctcaataaaaggacgtgtttcatttatggat
ttatcagatgatggtaccattttccataatttcgacaataggtatccaattggtgctgct
gtgcaagttaaagttaaagaagttgataatgagcatcaaactttggctttaacttcgaga
gaacattatattcgcagttttgacgatgtgaagaaaggtaagacatacccagcacgtatt
attaaagttaaggacctgtacgtgttggtagatcttggtgggaaggtgattgcttcatct
ttcatcaccgatgcattgaacaattattcggataaattggatcatggattccacgtcaat
gagtacgttggggcaaaagtgttggacatagatgcagatcaacaaaagatttctgttagt
ttgagggatgaagatagcactgacagaacaatcgactcctttgaagatttatctcgaggt
gatattgtcaaaggttttgttaagaatgtgagcaccaatggtgtttatgtttcattggga
agatctgtctttgcgttagtgagagtttctgatttgagtgattcgtacttgaaagattgg
aagaagtttttcaaacctaatcaatcagttacaggtaaaatcatcaattgtaaagaagaa
ggtagaatcttaatgaccttgaaagaaagtgaagttaacggagaattgaaaaccatgaag
acatttgatgatttagctgttggtgatatatttgaaggtcatgtgaccaagactactgat
tttggtgtatttgtcaaattggatggaactgtaaatatcagcggattgtgtcatcattca
gaaatttcagaaaatgatgtcaaaaacgtgatggcgttgtttggagagggggatcgtgta
aaggtgaagatattgaagattgatccttctaagaagcaattatctttgggaatgaaagcc
tcctactttgatgatactcatgaagaggttgatgatgacgttgaaatggaaattgctgag
gaagatgaagaggaagatgacgaaactagtggagagagtgaaaatgaagatgtaatcatt
gatgctgaagaagagagtgacgacgatgataacgaagaggaagaagaaggagaagaagcc
gaaacatcaacaaccgaatctaacgctttatccacaaacggtttcgattggacagcatcc
atcctagatcaaactgaagatcatgattcctcctccgatgatgaagatttcatgagtaat
tcaaagagttcaaggccaaggaaatctcgtaaacaaactcgagttgaagacaagaccatt
gatttaaacacccgcgccccacaatctgttgctgattttgagaggttattaattggtaac
ccaaacagttctattttgtggatgaattacatgtcatttaatctacaattgagtgaagtt
gataaagctagacaaattggtgaacgtgctttagaaactatcaattatcgtgaagaacaa
gaaaaaatgaatatttggatcgctttgctaaacttggaaaatacatttggtactgatgaa
agtttagatgcagtattcaaaaaagcatgtcaatatatggattcatttataattcatcaa
aaattggcaagtattttaataatgagtgagaaatatgatcaagcacgtgaattgtttaaa
gccatgggtaagaaatttggtcaaaatgttttaacttgggtcttgtatggatcattttta
ttggatcaagatttaaataatgaagctcgtcaagtattagccagagctttacaagtttta
cctaaacgtgatcatattgaagttgtacgaaagtttgctcaattagaatatgccaaggga
gacgttgaacaagcaagatcgttatttgaaggattggttgctgatgccccgaagagaatt
gatttgtggaatgtgtacatcgatcaagaaatcaagtatggtaatggtggtgatggtgat
gatgacaacaaggattcttccaataagcaacaaattgaaagtttgtttgaaagagtgatt
gaaaataaaaaagtatcacgtaaacaggccaagtttttcttcaacaagtggttggcatat
gaagaaggtcaaggtgatgagaagatggttggtaaagtcaaagccaaagccattgaatat
gtgcgtgaaaatgagtag
DBGET
integrated database retrieval system
