Candida orthopsilosis: CORT_0A06330
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Entry
CORT_0A06330 CDS
T02488
Name
(RefSeq) U2 snRNP component
KO
K14829
pre-rRNA-processing protein IPI3
Organism
cot
Candida orthopsilosis
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cot03009
]
CORT_0A06330
Ribosome biogenesis [BR:
cot03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
CORT_0A06330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_Prp19
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
EIF3I
WDR55
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_CAF1B_HIR1
NBCH_WD40
WDR54
Motif
Other DBs
NCBI-GeneID:
14537753
NCBI-ProteinID:
XP_003866459
UniProt:
H8WY72
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All DBs
Position
1:1403392..1404951
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AA seq
519 aa
AA seq
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MDEVLFYISQGDQTDSKKSAAESFAYTSSIHSSKQYQSYRHASSPLRGTCITGIGPGERI
FTCDSKKALINVYSHGKEGIDQRIPVPEALTTLHVIHHPQLDTKASDDEVLHEKPNFRIP
WLLCGGSKSGKLYIWEISSGDLLCVKEAHYQGISVIESSSCKTFLITGGEDARCLVWNLA
DLISIYGNNNNGGDENGQDHLRSVKPYWAIAENTLPITDVNLNPTGVINDLKLYTSSKDG
TVRIFDIMTKTQLTTFILPHSVECLTRDPANRALYVGLSNGQIKMIPLYKFNPHTSVLEG
VGGMNKIITIDPHDPNLTTTFVQHQDSSSSVLQICISMDGTSLISGDSKGQVYVSDIVTK
QTIKSFASLNFPVAYIHLQTISTKSLDATANNVRSDKKHRMVPTLKRVLASSDPVEHTLF
MDIPEPITIDEDDEDDESNGGFGSWLEAKRIEELQFKNLSDIDSTVKTIGKNNNNDAANS
SPNNTNLELKLKKVSEAYTDLRTKYEELLKEHAKLLDDK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagtactattctacatctcacaaggagaccaaactgactctaaaaagtcggca
gctgaatcatttgcatacacatcctcaattcattcttctaagcagtatcaatcatacaga
cacgcatcatcaccacttcgtggcacatgtatcacaggcataggtcctggagaacgtata
ttcacttgtgattccaaaaaggcattgattaatgtatattcccacggtaaagaaggtata
gaccaacgaatacctgttcctgaagcattaaccactttacacgtcattcatcatcctcaa
ttagacaccaaagcaagtgatgatgaagttctccacgaaaagccaaattttagaataccg
tggttactttgcggtggatcgaaatcaggtaaattgtacatttgggaaatatcatcgggc
gatttactttgtgtgaaggaggctcactaccaaggaatatcagttattgaatcaagtagt
tgcaaaacatttcttattactggtggtgaagatgcaagatgtcttgtttggaatttagct
gacttgatatccatatatggtaacaataacaatggaggtgatgaaaatggacaagatcat
ttgagatcagttaaaccatattgggccattgcggaaaacacattacctataactgatgtt
aacttgaaccctactggtgtgattaatgatttgaaattgtatacaagctctaaagatggt
acagtgagaatatttgatataatgacaaagacccaattaactacatttatcttacctcat
tcggttgagtgtttgactcgtgatccagcaaatagagcactttatgtgggattatcgaat
ggacaaatcaaaatgattccgttatataaattcaacccacatacttctgttcttgaaggt
gttggaggaatgaataaaattataactatcgatccacacgatccaaatttaacaactaca
tttgttcaacatcaagattcatcgtcatcggtactacaaatctgtatttccatggatgga
acaagtttgatctcaggtgattcaaagggacaagtctatgtatcagacatcgtcactaag
caaacaattaagagttttgccagtttgaatttccctgttgcttatattcatttacaaact
atactgactaaatcattagatgcgacggcaaataatgtcagatcagacaagaaacatcgt
atggtacccactttgaaacgtgttttagccagtagcgatccagtggaacatactttgttt
atggatattcctgagccaatcaccatcgatgaagatgatgaagatgatgaaagcaatggg
ggctttggttcctggttggaagcaaaacgaattgaggaattgcaatttaagaatttatct
gacatcgattcaaccgtaaaaaccattggcaaaaataacaacaacgacgcagctaactca
tcacctaataatacaaatttggaattgaaattaaagaaagtatctgaagcatataccgat
ttgagaaccaaatatgaagaacttctcaaagaacacgccaagcttcttgacgataaataa
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