Lodderomyces orthopsilosis: CORT_0A06490
Help
Entry
CORT_0A06490 CDS
T02488
Name
(RefSeq) Gcr3 protein
KO
K12882
nuclear cap-binding protein subunit 1
Organism
cot
Lodderomyces orthopsilosis
Pathway
cot03013
Nucleocytoplasmic transport
cot03015
mRNA surveillance pathway
cot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CORT_0A06490
09122 Translation
03013 Nucleocytoplasmic transport
CORT_0A06490
03015 mRNA surveillance pathway
CORT_0A06490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cot03019
]
CORT_0A06490
03041 Spliceosome [BR:
cot03041
]
CORT_0A06490
Messenger RNA biogenesis [BR:
cot03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
CORT_0A06490
Spliceosome [BR:
cot03041
]
Common components
Common spliceosomal components
Cap binding complex
CORT_0A06490
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
End3
Motif
Other DBs
NCBI-GeneID:
14538046
NCBI-ProteinID:
XP_003866475
UniProt:
H8WWP6
LinkDB
All DBs
Position
1:1443260..1446076
Genome browser
AA seq
938 aa
AA seq
DB search
MDPESNKRSRDEFEEQSGHANDGRFPPQQQNFDYDFKRQRIDPAQELINNVCKDIRRLGE
NSNVATQIDDVNYISNPIVAEFEKIESLRNAILSTMYALIIEQPHKINALGNLVFICNAK
NFVIAKYVVEYLHTKMQLLLDSIGGEVQADTSRENAGVLNNIKSILKFFGAISPIIDDYS
VVNVLKQLLQFAIDLQGGSEKRNGIAQEIYYNVLIATPYLLSNDKSEELHGYLNDIIELA
DKFPIIEPDSNTLIQPFDNKMENFEIPYQPKKMVSLILPALKKLQADDWQLKLFLDFEPF
LEPILKTILENNAISKDIVKHKLPQLSLPSTEKMNKYKPRNEDSIDRIWQQNSRVLLQVY
NQTTEFETVPVIESYIGLFFKDLSFDILTNLSFNKTEASIQLSILDLFFNRELFTPMGTS
IDELIEIDTKNRTGGNNPPLSTWKIEDIAVESILTMIFQLPHTLHREIYYYTVLISCCKE
SPDSMAPVFGRAIRYFYNNLQTLDFELKIRFLDWMTTQISNFEFSWKWDEWVQDSQQFAK
LKYHPKKNFIKNLIAKEIRLSNTKRIKESFVDVVDDRVVPFDEFYQYLDISVVPNTRDYI
INYDSALYGDSEEIRTKITEIYDAKQATLAAKSNATFQDEIFYNFTNPELPLSSVASQIY
EFIVSHYKSNKEMNELYNSVLEQVQQDQPQSDNMVQVDIPNPVKFVINLFFQTYAYIGSR
SIYSEVSILSRDVDKLKFLSGKPIDSKKVANPDDEFEKLYLEDDDVTNRQNWIIDAIFRI
WVHQPQVIFLILEYLIEFEILDPKYLIAKAFKTNLIIDNVSCIESINRILETSKAETLRE
LIFEIFTIVVKKLNELDLGIDDVVQIDELNEDNAPEVDKQWLFYEYLGLLKSYFRKYIKN
QATESNDDDVLQNIKNVFNDLENIPARIEILGWFKELS
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggatccagaatctaacaagagaagtagagacgaatttgaggaacagtcagggcacgcc
aatgacggtcgttttcctccacaacagcaaaattttgattatgatttcaaaagacaacgt
attgatccagcacaagaattaatcaacaatgtatgtaaggacattaggagactaggtgaa
aattccaacgttgcaactcagattgacgatgtcaactatatatccaaccctatagttgct
gaatttgaaaagattgagagccttagaaatgccatcttgtcgacgatgtatgcactcatt
attgaacaaccacacaagattaatgctcttggtaacttagtatttatctgcaatgccaaa
aactttgtcattgctaaatacgtggttgaatatttacatacaaagatgcagttgttgtta
gattcaattggtggggaggtacaagcagatacttcaagagaaaatgcaggtgtgcttaac
aatatcaagagtatcttgaaattttttggagctatatcgccaattattgatgactattca
gttgtcaatgtattgaagcagcttttgcaatttgccattgacttacaaggtggttcagaa
aagagaaatgggatagctcaggaaatttattataatgtattgattgcaacgccgtattta
ttgagcaatgataaaagtgaagagttgcatggatatttaaatgatattatcgaacttgct
gacaagtttcctatcattgaacccgattcaaataccttgatacaaccatttgataacaag
atggaaaattttgaaatcccttatcaacccaagaaaatggtgagtttaattttacctgca
ttgaaaaaattgcaagctgatgattggcaattgaaactcttcctcgactttgaaccattc
ttggaacctattttaaaaacaattttggaaaacaacgccatttcaaaagacattgtgaaa
cacaaattacctcaattatcattgccttcaacggagaaaatgaacaagtataagcctcgt
aatgaggatagtattgatcgtatatggcagcaaaattcccgtgttttacttcaggtttat
aaccaaactactgaatttgaaacagttccagttattgaatcctatattggactatttttc
aaagacttgtcatttgatatattgactaatttatcattcaacaagactgaagcatcaata
caattgtcaatcttggatttattcttcaatagagagttgtttactccaatgggtacatcg
attgacgaattgattgagatcgataccaagaatcgtactggtggaaataatcctccgtta
tctacttggaaaattgaagatattgccgttgaaagtatattgaccatgatttttcaattg
ccacacactttacatcgagaaatttactattatacagttttgatttcttgttgtaaggag
agtcctgattcaatggccccggtatttggtagagccattcgttatttctacaacaattta
cagacgttagatttcgagttaaagattaggttcttggattggatgactacacaaatttct
aattttgaatttagttggaaatgggatgaatgggtacaggattcacagcaatttgctaaa
ttgaaatatcatccaaaaaagaacttcatcaagaatttaattgctaaagagattagatta
tctaacacgaaaagaattaaagaaagttttgttgatgttgtcgatgatcgtgtggttcca
tttgatgaattttatcagtatttagatatttccgtggttcctaataccagagattacatt
attaattacgattctgcattgtatggagattcagaagaaattagaaccaaaattactgaa
atttacgatgctaaacaagcaacattggcagctaaaagtaatgctacttttcaagatgag
atattttacaatttcaccaatcctgagttaccattgagcagtgttgcttcacaaatttat
gaatttattgtatctcattacaagagtaacaaagaaatgaatgaattgtacaattcagta
cttgaacaagtccaacaagatcaaccacaatctgacaacatggtccaggtggatattccc
aacccagttaagtttgttataaacttgtttttccaaacttatgcatacattggatcaaga
tcaatttattccgaagtgagtatcttgagtcgcgatgttgataaattgaaattccttagt
ggaaaaccaatagattcaaaaaaagtggccaatcccgatgatgagtttgaaaaattgtac
cttgaagatgacgatgtcacaaatagacaaaattggataattgatgctatttttagaata
tgggttcatcaaccacaagtgattttcttaattttagaatatttgattgaatttgagatt
cttgatcccaaataccttattgcgaaggccttcaagactaatttaatcattgataatgta
tcttgcattgaatcgataaatcgaatattggaaacatcaaaagcagagacattgagggaa
ttgatatttgaaatttttactattgtcgtcaagaaactaaatgaattggatttgggtatt
gatgatgttgttcaaattgatgaattgaatgaagataatgcacccgaagttgataaacaa
tggttattttatgaatatttgggattgctcaagtcatattttagaaaatatattaaaaat
caagctactgaatcgaatgatgacgatgttttgcagaatataaagaatgtgtttaatgac
ttggaaaacatacctgctagaattgaaatacttggttggtttaaagagctttcatag
DBGET
integrated database retrieval system