Candida orthopsilosis: CORT_0A07340
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Entry
CORT_0A07340 CDS
T02488
Name
(RefSeq) Ria1 translation elongation factor
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
cot
Candida orthopsilosis
Pathway
cot03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CORT_0A07340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cot03009
]
CORT_0A07340
Ribosome biogenesis [BR:
cot03009
]
Eukaryotic type
Pre-60S particles
GTPases
CORT_0A07340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EFG_III
EF-G_D2
GTP_EFTU_D2
EFG_IV
Peptidase_C50
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
14537784
NCBI-ProteinID:
XP_003866558
UniProt:
H8WWX9
LinkDB
All DBs
Position
1:complement(1635396..1638554)
Genome browser
AA seq
1052 aa
AA seq
DB search
MSIHIFFQSDSALFQYFTLTMKISQETISKLQSDASCIRNICILAHVDHGKTSLSDSLLA
TNGIISQRMAGKIRYLDSREDEQLRGITMEASAISLYFRIMRRQKGDEEKIDVKEHLINL
IDSPGHIDFSSEVSTSSRLCDGAIVLVDAVEGVCSQTINVLRQCWIDKLKPILVINKLDR
LITEWKLSPLEAYQHISRVIEQVNSVIGSFYAGDRLEDDLNWREAGEVGEFVEKDDENLY
FVPEKNNVVFASAIDGWAFTVKTFAEIYSKKLGFSQNALSKTLWGDFYLDMKNKKIASGK
KLKGGNMKPLFVSLILDQIWAVYENCLIERNSEKLEKIIEKLGAKISPRDLRSKDLKNLL
NQIMSQWIPLSHAVLGTVIDNLPSPVEAQSERIDQILEETIYSAVETEQDKSKLVDPSLV
TALHDCDSSHADKHTMAYVSKLISVPNEELPKETEVGTDVSAEELRERTRIARELAKKAS
EAAAAAQDSRANDEYTIKPKKDPFEWEFEEEDFEQEGEEDTEASEETLVGFARVYSGTLF
KGQKLTVIGPKYDPSLPRGHEKNVDQIVNDVEIKDLFLIMGRELVRMEHVPAGNIVGVVG
LDNVVLKNATICSAIPGDKPYANFSSTSTLIHNKPIMKIAVEPTNPMKLAKLERGLDLLA
KADPVLEWYIDDESGELIVCVSGELHLERCLKDLEERFAKGCEVSVKEPVIPFRESLADD
VVNKERIDELADEEESDDTDLVGLDFDVFPLSTEITQFLIGNEGLLSEIARSKTNNSEAR
SLFAEKLTMLIDQDKSFYGFENAKTFVDHIVAFGPKRVGPNIFLDKTDKLKHFFATEHPE
EPFQFENNILNGAQLALNEGPLAAEPMQGIIVILKKAVINDIDEDKIIINRGKIINQTKA
LIHKQFLFKSPRLLLAMYTCEIQAAAEVLGKVYAVVQKREGSIISEEMKEGTPFFTVVAR
IPVIQAFGFSEDIRKKTSGAASPQLVFDGFDVLDIDPFWVPHTEEELEELGEFAERENVA
RRYMNNIRRRKGLFIDEKVVKNAEKQRTLKKD
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgagcatccatattttttttcaatctgactcagcactctttcaatactttacattaaca
atgaagatctctcaagagacaattagcaaactacagctggatgcttcttgcatcaggaat
atatgtatccttgctcatgttgatcatggtaaaacatcacttagtgactctttgttggca
acaaatggaataatctcgcaacgtatggcaggaaagatacgatacttagattcgagagag
gatgagcaactaagaggaattacaatggaggcatctgctatttccttgtactttagaata
atgagaagacaaaaaggagatgaagaaaagattgacgttaaggagcacttgattaatttg
attgattcacctggtcatattgatttctcttcagaggtgagcacatcttcgagattgtgc
gatggagccattgtattggttgatgcagtcgaaggtgtctgttcacaaactattaatgtt
ttacgtcaatgttggattgacaaactaaagcctattttggttattaacaagttggatcgg
ttgattactgagtggaagctcagccccctcgaggcatatcaacatatatcgagagtcata
gagcaagtcaattcagttatagggtccttttatgccggagacagacttgaagatgattta
aattggcgagaagctggggaagttggggaatttgttgaaaaagatgacgaaaatttgtac
tttgtgcctgaaaagaacaacgtagtatttgcttcagccattgatggatgggcatttaca
gtcaagacatttgcagaaatatatctgaaaaaattaggcttctcccaaaatgcattatca
aagactctctggggggatttttacttggacatgaaaaataaaaagattgcttctggcaaa
aagctcaaaggaggaaacatgaagccattgtttgtttccctaattttggatcaaatctgg
gccgtgtatgaaaactgtttaattgagagaaatctggaaaagttggagaaaattattgaa
aagctaggagccaaaatctcacctcgtgatttaagatctaaagatttgaaaaacttgtta
aatcaaataatgtcacaatggataccattgagccatgccgtgttgggtactgtcatagat
aacttgcctagccccgttgaagcacaactggaaaggatagaccagattttggaagagact
atttatagcgcagttgaaactgagcaggacaaaagcaaacttgttgatcccagtcttgta
acagccttgcatgattgtgacagctcacatgctgacaagcatactatggcttatgtttcg
aaattaatatcggtgcctaatgaagagctaccgaaggagacagaagtcggtactgatgtc
tctgcggaagagcttagagagaggactaggattgcaagggagttggccaagaaagcttct
gaagctgcagccgcggcacaagacagcagggcaaacgatgagtataccattaaaccgaaa
aaggacccatttgagtgggaatttgaagaagaggactttgagcaagagggggaagaagat
actgaggccagtgaagaaactctagtcggcttcgctcgcgtttattctggtaccctattc
aagggtcagaaactaaccgttattggaccaaaatatgatccctcattaccaagaggtcac
gaaaagaatgttgatcaaattgttaacgatgtggagataaaagatttgtttttgatcatg
ggtagagaattggtgagaatggagcacgttcctgctggtaatatcgttggtgtagtcggg
ttagacaatgttgttcttaaaaatgcaaccatttgctcagctatacctggggataagccg
tatgccaatttttcctccacgtcaactttaatccataacaagccaattatgaagatagct
gttgagccaacaaatcctatgaagttggcaaaattggaacgcggtttagatctacttgct
aaagctgatcctgttttggaatggtacattgacgacgagtcgggagaattgattgtctgt
gtttctggggagcttcatttggagaggtgtttgaaagatttggaggagcgatttgccaaa
ggttgtgaggtttcagtaaaagagccagtcataccattcagggaatcattggctgatgat
gtggtgaacaaggagaggattgatgaactagcagatgaagaggaaagcgatgatacagac
ctcgtgggccttgattttgatgtttttcctttgtcaactgaaatcacacagttcttaatt
ggcaatgaaggattgctaagtgagattgctagaagcaaaacaaataatctggaggcgagg
agtttgtttgctgagaaattgactatgctaatcgaccaagataagtcattttatggattt
gaaaatgccaaaacatttgttgatcatatagtagcatttggtcctaaacgagttggtcca
aatatctttttagataaaacggacaaactcaaacactttttcgctactgagcatccagag
gaaccatttcagtttgaaaacaatatcctaaatggtgctcaattggcactcaatgaagga
ccgttagctgctgagccaatgcaaggtataattgtcattttaaagaaagccgtaattaac
gatattgacgaggacaagattataatcaatcgtggtaaaatcatcaaccaaaccaaagct
ttaattcacaagcaattcttattcaagtcgccacgtttgcttcttgcaatgtatacatgt
gaaatacaagcagctgctgaagtgttgggtaaagtttatgcagtggttcaaaagcgtgaa
gggtccattatttcagaggaaatgaaggaaggaactccttttttcaccgttgttgctaga
ataccagtcatccaagcatttggttttagtgaagacattcgaaaaaagacttcaggtgct
gcaagtccacagcttgtctttgacggattcgatgttctcgacattgatcctttctgggtg
cctcacaccgaagaggaattggaagaattgggtgagtttgcagagagggaaaatgtcgca
aggaggtatatgaacaacatcagaagaagaaaaggtttgtttattgatgaaaaagtggtc
aagaatgcagaaaagcaaaggaccttaaagaaggattag
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