Candida orthopsilosis: CORT_0A07540
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Entry
CORT_0A07540 CDS
T02488
Name
(RefSeq) hypothetical protein
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
cot
Candida orthopsilosis
Pathway
cot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CORT_0A07540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cot03019
]
CORT_0A07540
03036 Chromosome and associated proteins [BR:
cot03036
]
CORT_0A07540
Enzymes [BR:
cot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CORT_0A07540
Messenger RNA biogenesis [BR:
cot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
CORT_0A07540
mRNA degradation factors
5'-3' decay
Decapping complex
CORT_0A07540
Chromosome and associated proteins [BR:
cot03036
]
Eukaryotic type
Gene silencing
piRNA pathway
CORT_0A07540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NA-iREase2
Arcadin_1
Motif
Other DBs
NCBI-GeneID:
14537850
NCBI-ProteinID:
XP_003866579
UniProt:
H8WX00
LinkDB
All DBs
Position
1:1682786..1684069
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AA seq
427 aa
AA seq
DB search
MTEVNDWKQNLNLPQKDTRPQTDDVLNTKGKSFEEFNLKRELLMGIFEAGFEKPSPIQEE
SIPMALAGRDILARAKNGTGKTASFIIPCLQLCKPKLNKIQALILVPTRELALQTSQVVR
TLGKHLGVQCMVTTGGTSLRDDIVRLNDPVHILVGTPGRVLDLASRKLADLSECPLFVMD
EADKMLSREFKNIIEQILEFFPPHRQALLFSATFPITVKHFMDQHLNKPYEINLMDELTL
KGISQFYAFVEEKQKLHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCYYSHA
KMPQQARNKVFHEFRQGKVRNLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSG
RFGHLGLAINLMSWNDRYSLYKIEQELGTEIKPIPATIDKSLYVAENEDAVPKPFKGEDL
SRVKNSH
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggttaacgattggaaacaaaaccttaaccttcctcaaaaggacacccgacca
caaactgatgatgttttaaacaccaaaggtaaatcatttgaagaattcaatttgaaaaga
gaattactcatgggtatttttgaagctggatttgaaaaaccgtcaccaattcaagaagag
tctattcctatggctttagctggtagagatatccttgctagagctaaaaatggtactggt
aaaactgcttcttttattatcccttgtttacaattgtgtaaacccaaattaaacaaaata
caagctttgatattagtacctacacgagaattggccttgcaaacgtcgcaagttgtgaga
acgttgggcaaacatttaggagttcagtgtatggtaaccacaggtggtacctcattacga
gatgatattgttagattaaatgatcctgttcatatattagttggtacccctggtagagtt
ttagatttagcatcgaggaaacttgccgatttatcagaatgtccactttttgtcatggat
gaagctgataagatgttgtcaagagagtttaagaatataatagaacaaatattagaattc
ttccccccacatagacaagcattgttgttttctgccactttccccatcacagtgaagcat
tttatggatcaacatttgaataaaccatatgaaattaatcttatggatgaattaactttg
aagggtatatcacaattttatgcttttgtggaggagaagcaaaaattgcattgcttaaac
accttattttccaaactacaaatcaatcaatcaatcatcttttgcaattcaactaatcga
gttgaattattggccaaaaaaattactgaattaggctattcatgttattattctcatgcg
aaaatgccacaacaagcaagaaataaagtttttcatgaatttagacaaggtaaagtgcgt
aacttagtttgttcagatttgttaactagaggtattgatatacaagctgttaatgtcgtt
attaattttgatttcccaaaaactgccgaaacttatttgcatagaattggtcgttcaggt
agatttggacacttgggtttagctataaatttaatgagttggaatgatagatattcctta
tacaagattgaacaagaattgggaactgaaatcaaaccgattccagcaacaattgataaa
tcattatatgttgctgaaaatgaggatgctgtgcctaagccattcaagggggaagattta
tcaagagtgaagaactcacactag
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