Candida orthopsilosis: CORT_0A08800
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Entry
CORT_0A08800 CDS
T02488
Name
(RefSeq) Rfc1 protein
KO
K10754
replication factor C subunit 1
Organism
cot
Candida orthopsilosis
Pathway
cot03030
DNA replication
cot03410
Base excision repair
cot03420
Nucleotide excision repair
cot03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CORT_0A08800
03410 Base excision repair
CORT_0A08800
03420 Nucleotide excision repair
CORT_0A08800
03430 Mismatch repair
CORT_0A08800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cot03032
]
CORT_0A08800
03400 DNA repair and recombination proteins [BR:
cot03400
]
CORT_0A08800
DNA replication proteins [BR:
cot03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CORT_0A08800
DNA repair and recombination proteins [BR:
cot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CORT_0A08800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
nSTAND3
RuvB_N
RNA_helicase
Opi1
AAA_16
NTPase_1
AAA_14
CCDC47
PTCB-BRCT
NPHP3_N
AAA_17
AAA_33
AAA_28
AAA_18
AAA_11
Motif
Other DBs
NCBI-GeneID:
14537914
NCBI-ProteinID:
XP_003866703
UniProt:
H8WYE9
LinkDB
All DBs
Position
1:complement(join(1941778..1944291,1944347..1944397))
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AA seq
854 aa
AA seq
DB search
MVNIQDFFKNQQGKSGTKRKAEETESPSAKRTKPTAMESKPKVIELDDDFEFDDDDDDDI
LEIEPPKKASPKKKQPEASSKKPQGKQSTTKKETKPQSSEPMGGESIDAVLAKIPDAELP
EMNEGEKPNFFALKAQQNVTASTSVDLPAAQPNCLTGLTIVFTGQMPSLDRNTAESTAQQ
YGAKVTKSISKKTSLVVIGSDAGPSKVKKIKEFKIKAIDEAGFIQLLSSMPADGGSGEAA
VKAKEKREQEERKIIEEAERAEKEEREEEERKRRRAQTTASQNVSNGTPQMPPATKDVPA
KDRLWTDKHAPKDFNQLCGNKGQVQKLRNWLEHWFENKARNFSGGPENPGSYRAALISGP
PGIGKTTAAHMVANSLGFDVLEKNASDVRSKSLLNANIKSVLSNTSVIGFFKHRDDEHQS
SNSKKLCLIMDEVDGMSSGDHGGAGALSQFCRITNMPMILICNDKSLPKMRTFDRVTYDL
PFRRPTENEVKSRLMTIALREGIKLDPNIIGQLVQATSNDIRQMINLLSTVSKTQKLIGT
NNVKDIQASWKKQIILKPFDIAGRLLSSGLWSGPNQNLNEKLDLYFNDIDFAPLMIQENY
LNTRPRLPGSHIKHVAQAADDISLSDSINSLIRSSEQQWSLLPFHGLMSTVKPSYEVAGQ
VTGRLNFSAWLGQNSKQMKYQRMLQELQYHTRVKTSTTKQELRLDYLNPLWIKLNIPIKQ
QGEAGIDQTIETMDAYYLTKEDYDNISDMLNKPIDLDKKDKTAFTRKYNNAIHPTVIYKT
GNSFGAGSKRTTPAEVDYEDVVEDDMEDVEDDNDGEESDKIDAKKDKLIKQVPVGKGGAA
KRSTKGSVRKRQRK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacattcaagacttcttcaagaatcagcagggtaagtccggtacaaaacgtaag
gcagaggagactgaatcaccaagtgcgaaaaggactaaaccaacagcaatggagtctaaa
ccaaaagtgattgagttagacgatgatttcgaatttgatgatgacgatgatgatgatatt
ttagagatagagccaccaaaaaaggcatctcctaagaagaaacaacctgaagcatcatct
aagaaaccccaagggaaacaatcaacgacgaaaaaggaaacaaagccgcaatcatcggaa
cccatgggtggcgaatcaatagatgcagtgcttgcaaagattcctgatgcagaattgcct
gaaatgaatgagggtgaaaagcctaacttttttgcactcaaagctcaacaaaatgtgact
gcctctacactggtagacttaccagcagcccaacccaattgcctaacagggttgacaatc
gtgttcacgggacaaatgccttctttggatcgaaatactgcagagctgactgcccaacaa
tatggagcaaaagtcaccaagtcaatttctaaaaagacaagtttggtagtgattggatct
gatgcagggccttcaaaggttaaaaagattaaagaattcaaaatcaaggcaatagatgag
gccggttttattcaattgttgtcgagtatgcccgccgatggtggcagtggtgaagcagct
gtaaaagctaaggaaaagagggagcaagaggagaggaaaattatcgaagaagcagaaagg
gctgaaaaggaagaaagggaggaggaagaaagaaagagaaggagagcacaaacaactgca
tcccaaaatgtttcgaatggaacaccacagatgccacccgccaccaaagatgttccggcc
aaagatagattgtggacagacaagcacgcaccaaaagatttcaaccagttgtgtggaaat
aagggccaggttcagaagttgcgcaattggctagagcactggtttgagaacaaagccagg
aatttctccgggggtcctgaaaatccaggttcatatagagctgccttgattagtggtcct
ccaggaattggtaagaccactgcagctcatatggtggccaattctcttggctttgatgtg
ttggagaaaaatgcatctgatgttcgttccaaatctttgttgaatgcaaacattaagtca
gtattgagcaacacttctgttattggattcttcaaacatcgtgatgatgagcatcaaagt
agtaacagcaagaagctttgtttgatcatggatgaagtcgatggtatgtcgagtggagat
catggtggagcaggggcattgtcccaattttgtcgaatcacgaatatgcctatgattttg
atttgtaacgacaagtcattgcctaaaatgagaacatttgatagggtgacatacgacttg
ccattccggagaccaacagaaaatgaggtgaagagtagattgatgacgattgcattacgt
gaaggtatcaagttagatccaaatattattggacagttggttcaagcgacatctaatgat
attagacaaatgattaacttgttatccacagtttcaaaaactcaaaagctcattggtaca
aacaatgtcaaggatatacaagccagttggaaaaaacaaattattttaaagccttttgat
attgctggtaggctattatcgtccggtctttggtcaggccctaatcaaaacttaaacgaa
aagcttgatttgtactttaatgatattgattttgctcccttgatgatacaggagaactat
ttgaatactagaccgaggcttccaggatctcatattaaacatgtcgcacaagctgctgat
gatattagtttatctgattctatcaactcgttgatcaggtctagtgaacagcaatggagc
ttgttgcccttccatgggttaatgtcaacagtaaaaccctcgtatgaagtggcaggtcaa
gtgacgggcaggttgaatttcagtgcttggttgggtcaaaattcaaaacaaatgaaatac
cagagaatgttacaagaattgcaataccacaccagagttaagacttcaactacgaagcaa
gagttgcgtttggattatttaaacccattgtggattaaattaaacatcccaatcaaacaa
caaggagaggcgggaatcgaccaaacaatcgagacaatggacgcatattacttaacaaag
gaggactacgataatataagtgatatgcttaacaagcctattgatttggataagaaagat
aagacagcatttactcgtaagtacaacaatgctatccaccctacagttatttacaaaaca
ggaaattcatttggtgctgggagtaaaagaacaaccccagcagaagtcgattatgaagat
gttgtggaagatgatatggaagatgttgaagatgataatgatggagaagagagtgataag
attgatgcaaagaaggataagttgatcaagcaggtgccagtaggaaaaggtggggcagct
aagagatcaaccaaaggatcagttagaaagaggcagaggaagtaa
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