Candida orthopsilosis: CORT_0A09570
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Entry
CORT_0A09570 CDS
T02488
Name
(RefSeq) Prp39 component of the U1 snRNP
KO
K13217
pre-mRNA-processing factor 39
Organism
cot
Candida orthopsilosis
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cot03041
]
CORT_0A09570
Spliceosome [BR:
cot03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
CORT_0A09570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
UTP6_C
WHD_HrcA
NikR_C
Motif
Other DBs
NCBI-GeneID:
14537688
NCBI-ProteinID:
XP_003866781
UniProt:
H8WYM7
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Position
1:complement(2110263..2112374)
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AA seq
703 aa
AA seq
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MTTLQHLPSDLETELESVTTSNNDFADSLGQKLQRSPNDIDTWNQLFSTIDKVISDNISQ
DDTTKTTLSDEVKTKIHNTYKTLLTRFPYLEEIWKKWSVVEYKMDGLEASIEILRMAVES
FPHSVSLWTDYLTALKSTQCADSEQFRLTYTEALRYNAYNFVSHPIWDKAIEFETETQPN
SKEVLSLYLKVVNIPLYQYAQYYSQFSEINKNFDIHELIDEAKLNDYVEKFGKLKTEDLS
LIEKHQIIDDYFATIFASTQAKVSSNWEYEQLLLHQDFSFDRKGIEEERTTWVEYIDREI
LIYQVDNDENRFALICSLFERALIPNCFDEDLWLKYIKFIDGLGIPDEKKCELEREIYIR
ANAKFIPLNQCKVRKLYAYFLLKQNDIDSAVEYLFDWMKSLSGTSKQYFKLPYLEMTREI
IHIWKMSLDKEKFLEAMELLLDNYFDKRNEEKRMKSENKEASRNCGACQLPDALLYSFAK
FLNEDSIPIIVDQCLEVYKCQGNSVKIRTLFNKYHREPSLVKSPSFWKFIFKYEGIVENN
LSNLKSIYNFIRVESQLPKPIIDMFVDWYYDIASANIREYLVINNGRSDDSMIFKDLEMS
NSLYYNKLTTKRLAKNNYKFIDNPKSMADPEQSYLDLCSKQAGHPGVFIDANPEITNSFM
NRGRYIDLTEEAIPTPLLPTFKGVEKAQALGKKRAHISRTTKK
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgactacactacagcatttaccatccgatttggaaactgaattagaatctgttactact
tcaaacaatgactttgctgacctgctaggacaaaaactacaaaggagccccaatgatatt
gacacttggaatcagttgttcagtactatcgacaaggtcattagcgataatatatctcag
gatgataccaccaaaactacactatctgatgaagtgaaaaccaaaatacataacacctat
aaaacgttgttgaccagatttccgtatttggaagaaatttggaaaaagtggctggtggtt
gaatacaaaatggatggacttgaggcatcaattgagatcctaagaatggcagttgagtcc
tttccccactcggttagcctatggactgactatttgaccgctttgaagtctacccaatgt
gctgattctgaacaatttagactaacttatacggaagcattacgatataatgcgtacaat
tttgtttctcatccgatctgggataaagctattgaatttgaaacagagactcaaccaaac
tctaaagaagtgttgtcattgtacttgaaggtggttaatattcctctatatcaatatgcg
caatattatagtcaattctccgagatcaacaagaatttcgatatacacgaattgatagac
gaggcaaagttgaatgattacgtggagaaatttggaaaattaaaaactgaagacttgtct
ttaatagagaagcatcagatcatagacgactattttgcaactatatttgcttctacacaa
gcaaaagttagctccaattgggagtacgagcaactactattgcatcaagatttctcattt
gacagaaagggaattgaagaggagagaactacttgggttgagtatatcgatagagagatt
ttaatttatcaggtcgataatgatgaaaatcgatttgctctcatttgtagcttgtttgaa
agagcattaataccgaattgttttgatgaagatctatggttgaaatatatcaagttcatc
gacgggttagggatccccgatgagaagaaatgtgaactagagagagagatatacatacga
gcaaatgcaaaattcattccattgaatcaatgcaaggtgagaaaattgtatgcatacttt
ttattgaaacaaaatgacattgattcggctgtcgagtatttatttgattggatgaagctg
cttagtggtacctcaaagcagtatttcaagttaccatacttggaaatgacccgtgagatc
atacatatttggaaaatgctgctagacaaggagaagtttctagaggcgatggagcttctc
cttgacaattattttgataaacgtaatgaggaaaaaaggatgaagtcagagaataaagaa
gcatcaaggaattgtggtgcatgccaattaccggatgctctattgtacctgtttgccaaa
ttccttaatgaagattcaattccaataattgttgatcaatgcctagaagtatacaaatgt
caagggaactctgtcaagattaggaccttattcaataaataccacagggaacccagttta
gtaaaatcaccatcattctggaaatttatttttaaatatgaaggtattgttgaaaataac
ttgtccaatttgaaactgatctacaacttcattcgagtagaatcacaattgcccaagcca
ataatagacatgtttgttgattggtattatgacattgcatccgccaacataagagaatat
ttggtaattaacaatggccgatcggatgatagtatgattttcaaagatttggaaatgtct
aattcgctatattataacaaattgacaacaaaacgtttagccaagaataattacaaattc
attgataatccaaagtccatggcagatccagaacagagctatcttgacttatgctcgaaa
caagctggtcatcctggcgtgtttattgatgctaatccagaaattacaaactcattcatg
aataggggtaggtatattgatcttacagaggaagcaattcccaccccactactacctact
ttcaaaggggtagagaaagctcaagctttaggtaagaagagggctcacatttcacgtaca
acaaaaaagtga
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