Candida orthopsilosis: CORT_0A10270
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Entry
CORT_0A10270 CDS
T02488
Name
(RefSeq) Utp21 U3 snoRNP protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
cot
Candida orthopsilosis
Pathway
cot03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CORT_0A10270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cot03009
]
CORT_0A10270
Ribosome biogenesis [BR:
cot03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CORT_0A10270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_RSE1_2nd
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_CAF1B_HIR1
PEP5_VPS11_N
Beta-prop_RIG_1st
Beta-prop_Nup120_160
WDR90_beta-prop_4th
Cytochrom_D1
NBCH_WD40
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
14537543
NCBI-ProteinID:
XP_003866851
UniProt:
H8WXA7
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All DBs
Position
1:2247708..2250527
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AA seq
939 aa
AA seq
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MVELFDKKRKIEGDSAVKKAPKPSRIFSPFRVLGNVTDSTPFAIGTLGSTFYAVTSTGRT
FQIYDLATLHLLFVSQSQTKSKITCFATHHHYVFAAYGNEIGVYRRGRLEKTLTCETTGV
ITHLCYFGEYLVAGSTEGDLLVFKKSEGSKYPSELYSVLKAVNASVDGDIVGIVHPPTYL
NKIAVATTTSVLIVNVRSGKVLFKSPQHQFGEENISCIECAPALDIVAVGTSTGDIFIFN
LRKGTILGDKITTSGSESSFKVTSISFRTDGEPHLVAGLNNGDLYFHDLDKNSRVHILRN
AHKESFGGVAKAQFLNGQPIVLTNGGDNHLKEFVFDPSLTSTNSSIITPPRHLRSRGGHS
APPVAITFPEEDRTHFILSASRDRSFWSFSLRKDAQAQEFSQRMHKSKDGKRQAGVIASL
KEKFPEIIAVSSSEARTGDWENIITAHKDEPFARTWDSSTKRVGRNVLNTVDQGFCKAVC
ISQCGNFGLVGSSFGGIGVYNLQSGLLRKKYILHKQAVTGLAIDGMNRKMVSCGLDGIVG
FYDFGKSKYLGKLQLDTPITSMVYHKQSDLIACTLDDLSIVVIDVTTQKVVRVLIGHSNR
ISGLDFSPDGRWIVSVGLDSTLRTWDLPTGGCIDGVVLPVVATSVKFSPLGDLIATTHVS
GNGISLWTNRAQFKPVSTRHIEEEEFSTILLPNAAGDGGSTILDGALDEEQDKDEYALGK
YDSKSQINESLITLSLGPRTKFTTLIHLDAIKQNNKPKEAIKKPEKAPFFLSLSGEAVGD
RASVAEGSQHKEVQGSAKEDSRLLSLSEANGHSFESEFTKSLRSSAERNDYASFLEYLVK
LSPATLDLEIRSLNSQPPYQEMTNFIRALIIGLKGNTNFELIETIFSLYFKVHGDIVHQT
EESSDLRITLNEYTQVSQEMNEKMDEAVKYCSSVINFIL
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggttgaattgttcgacaagaagagaaagatagagggagatagtgctgtaaaaaaagct
ccaaaaccttcgaggattttcagtccctttagagtcttgggtaatgtcacagactcaact
ccgtttgccataggtaccttaggatcaacattttacgctgtaacatctactggaagaaca
tttcaaatttacgacttggcaacactacatttattatttgtatctcaatcacaaaccaaa
tccaagattacctgctttgctactcatcaccattatgtttttgccgcttacggcaacgaa
attggggtttacagacgaggaagattagaaaagacgttgacttgcgaaaccactggtgtc
attactcacttgtgctattttggggagtatcttgtagcaggtagtactgaaggtgattta
ttggtattcaaaaagtctgaagggtcgaaatatccatctgaattatattctgtcctcaag
gccgtcaatgccagcgttgatggagacatagttggaattgtgcacccacccacatatttg
aacaaaattgcagttgctacaaccacctctgttctaattgtgaatgttcgtctgggtaaa
gtgttgtttaaatcaccgcaacatcaattcggcgaggaaaatatttcttgcattgaatgc
gctcctgcacttgatattgtagctgttgggacttctactggtgatatttttatcttcaat
ttaagaaaaggtacgatcttgggagacaagattaccacatcaggatcagaatcatctttt
aaagtgacgtcgatttcgttcagaacagatggtgagccgcatttggttgctggtttgaat
aatggggatttatactttcacgacttggataaaaatagtcgtgtgcatatattaaggaac
gctcacaaggagtcatttggaggtgtagcaaaagcacaatttttgaacggacagcctatt
gttttaaccaatggtggtgataaccatttgaaagaatttgtctttgatcctagtctcact
tcaacaaactcctcaataattacaccgccacgtcatttaagatcaagaggtggtcattcg
gcaccaccggtagctataacatttcccgaggaagacaggactcattttatattaagtgcc
tccagagatcggtccttttggagcttttcgttgagaaaagatgcgcaagcacaagagttc
tctcagagaatgcacaaatcaaaggacggaaaaagacaagcaggagtcatcgcttcattg
aaggagaaattccccgaaattattgcagtttcctcatcagaggcaagaactggtgattgg
gaaaacataataaccgcacacaaggatgaaccttttgctagaacttgggactcctctacc
aaaagagtcggaagaaatgttttgaacaccgttgatcaaggtttttgcaaagctgtttgc
atttcacaatgtggtaattttggtcttgtcggttcctcatttgggggcattggtgtttac
aacttacaatcaggcttattaaggaaaaagtacattttgcataaacaagccgtgaccggt
cttgcaatcgatggaatgaacagaaagatggtaagctgtggtttagacggaattgttggt
ttctacgattttggtaagtctaaatacttgggaaaactccaactagatacgccaattact
tctatggtatatcacaagcaatcagacttgatagcatgtacattggacgatttatcaatt
gttgtgattgatgtaaccacgcaaaaagttgtcagagtactcattggtcactcaaatcga
atttcaggtttggacttttctccagatggaagatggattgtatccgttggtttggactca
actttgagaacatgggatttgcctacaggtggatgtattgacggagttgtgttgcctgtg
gtggccacatcagtgaaattttctcctcttggtgatttaatcgcaacgacccacgtttca
ggtaacggtatatcgttatggaccaaccgtgctcaatttaagccggtatcaacaagacat
attgaagaggaagagttttctacgattttattgccaaacgcagcaggtgacggtggatca
actatattagatggtgctttagatgaggaacaagacaaagacgaatacgccttagggaag
tatgactctaaaagtcaaatcaatgaaagtttaataacgttgtccttaggcccaagaact
aaattcaccactttgattcatttggatgctatcaagcaaaacaacaagcccaaagaagca
atcaagaaaccagaaaaggccccattctttttgagcttgagcggtgaagcggtaggtgac
agggcctcagttgctgaaggtctgcaacacaaagaagtgcaaggatctgctaaagaagat
agtaggctcttatccttgagcgaggcgaatgggcactcttttgaaagtgagtttacaaag
tcgttgagatcttctgcagaaagaaatgactatgcttcattcttggagtatcttgtcaag
ttatctcccgcaaccttggacctcgaaattagatctttaaattcacagccaccttatcaa
gagatgacaaattttatcagggcattgatcattgggttaaagggtaatacaaatttcgag
cttatagaaaccatattttcactatacttcaaagttcacggagacattgtccaccaaacc
gaagaatcatcagatttgcgtattacattgaatgaatacacccaagttagccaagagatg
aatgagaagatggatgaagcggtcaaatactgttccagtgtaatcaattttattttgtag
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