Candida orthopsilosis: CORT_0A10290
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Entry
CORT_0A10290 CDS
T02488
Name
(RefSeq) Yth1 mRNA cleavage and polyadenylation specificity factor
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cot
Candida orthopsilosis
Pathway
cot03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CORT_0A10290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cot03021
]
CORT_0A10290
03019 Messenger RNA biogenesis [BR:
cot03019
]
CORT_0A10290
Transcription machinery [BR:
cot03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CORT_0A10290
Messenger RNA biogenesis [BR:
cot03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CORT_0A10290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
zf-CCCH_4
zf-CCCH_3
zf-CCCH_RBM22
Motif
Other DBs
NCBI-GeneID:
14537541
NCBI-ProteinID:
XP_003866853
UniProt:
H8WXA9
LinkDB
All DBs
Position
1:2253948..2254598
Genome browser
AA seq
216 aa
AA seq
DB search
MLSSNPIIHPNYQNHRFKFETFLRNEYNFGLNPDRPICPLYNPHNPQTSCPLGSNCPNKH
VSQMYSNKVVCKHWLRGLCKKGDHCEFLHEYNLRKMPECLFYSKNGFCTQGSECLYQHID
PQSKIPECMNYNAGFCAEGPNCKNRHVRRTVCPYYMAGFCPKGPECEHTHPKFDHHNLYL
RIKPDPIRVTQKEAHDESNDNGYGQIEATSSNAIAV
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgcttagtctgaatccaataatacacccaaactatcaaaaccatcgattcaaattcgaa
acttttctacgaaacgaatacaactttggtttgaacccagacaggccaatatgtcccctc
tacaatccacacaatccccagacgtcatgcccactaggctcaaattgccccaacaaacat
gtgtcccaaatgtattccaataaagttgtatgtaaacattggttacgtggtttatgtaaa
aaaggtgatcattgtgaatttctccatgaatataatctacgcaagatgcctgaatgtttg
ttctattccaaaaatggattttgtactcaaggtagtgaatgtttgtatcaacacattgat
ccacaactgaagattcctgaatgtatgaattataatgctggattttgtgccgagggtccc
aattgtaagaatcggcatgtgagaaggacggtatgtccgtattatatggcaggattttgt
ccaaagggaccagaatgtgaacacacccatcccaaatttgaccatcataatttgtatttg
aggataaagccagatccaatcagagtaacccaaaaggaagcccatgatgagagtaatgac
aatggatatggtcaaattgaagctacgagtagtaatgcaatagctgtatag
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