Candida orthopsilosis: CORT_0A11350
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Entry
CORT_0A11350 CDS
T02488
Name
(RefSeq) Snf2 protein
KO
K11786
ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
cot
Candida orthopsilosis
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cot03021
]
CORT_0A11350
03036 Chromosome and associated proteins [BR:
cot03036
]
CORT_0A11350
Transcription machinery [BR:
cot03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
CORT_0A11350
RSC complex
CORT_0A11350
Chromosome and associated proteins [BR:
cot03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
CORT_0A11350
SWI/SNF complex
CORT_0A11350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
SnAC
HSA
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
14537337
NCBI-ProteinID:
XP_003866958
UniProt:
H8WXL4
LinkDB
All DBs
Position
1:2503343..2508217
Genome browser
AA seq
1624 aa
AA seq
DB search
MNRMPTKEEVQKIVQRWHQLRDQYGDQVVNVPEFAQLNKTINNIKMQQQQLQQHMQQQQQ
QQQQQQQQQQRNIQRPQMPQQGQNQQPSRSSSQAHSQQSQQRLQHQGSPVTSNPVPPTPN
QQFTNVTNGNNMGAQMGNMAASPAANVQSSVSGTPFSQDVNLLANSTNNNRYPAQFTNRT
IQNGTNTQQNVNQNANSNWSLNSPAQSSPTTESAFTNQQFQLLKSQMQAIKYLTKSPNQG
PMPQNLVSFVTNPASSYPTDPYLSTPARNNSAINPSFPSRVASISNNSTGATDVQAPTEP
VEKKKGKRGPKPKNKDQPKKMSKKQIKEEEQRLAAEKQREELERFHRIKQEEYQVPQQNP
LGPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAQQQAQQQAQQQAQAEPNLTPQESEFSFA
DPSPPVLLNKIVNEKNKDSKIVVPVTKPTVEVDTFERVDIVGDKTHDVPLSFLYTPQSRI
QIPSLIPQGLSLEQIAANRELFLIFSIENEKDSIRSEIQSLGNNDPKRKDKLVTKLNELE
IIPIQKQARGKLLSQVWYSKSLLPNSHPNFLARFNTLSMESVSVTIDLYRHQLESLMREQ
NKKHSHVLDQVLDFSTRNSARANKKADKVSRFMHKIAGLHNSTAREEQKKLEKMAKQRLQ
ALKSNDEEAYLKLLDHTKDTRITHLLRQTNQFLDSLAQAVQTQQKEAEANLASTGRLPEG
TAEAVDEDEKREKTDYYNVAHRIKEEVTKQPSILVGGTLKEYQLKGLQWMVSLFNNHLNG
ILADEMGLGKTIQTISLLTYLIEVKKIPGPFLVIVPLSTVTNWNLEFEKWAPTVKKITYK
GTPNQRKAMQHEIKTGNFQILLTTFEYIIKDKGLLGRVKWVHMIIDEGHRMKNSNSKLSE
TLTTNYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDK
IELSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPNKVEKVVKCKMSALQSKLYQQMLR
YNALYAGDPNDETAVVPIKNANNQIMQLKKICNHPFVYEDVENFINPTSENNDLIWRVAG
KFELLDKVLPKFKETGHKVLIFFQMTQVMDIMEDFLRLRGMKHMRLDGGTKADDRTELLK
LFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVR
ILRLITENSVEEMILERAHAKLEIDGKVIQAGKFDNKSTAEEQEAMLRALIEKEDERRTK
GLDEEEEDLDDDELNEIIARNEAELVKFKELDEERYAATRDASYPTRLLSEQELPPIYKK
DPEEILKKDDIYTEDYGRGARERKTTKYDDNLTEEQWLKQIEGVVSDDDDDDDEGDFNSD
SDIYQSGKSSRGKSKGKRKRGFGKARGEKVHALDGDDDSTNEYDSSSKRSADESDNLISQ
KRQKLDTPEPGSAPGNGRGRGKLRGRGRGRGRGRGSLLSRSTPSIDPLSPDERAMLQNNI
ETLLGLIMNHKNEEGRALSDLFLVKPSRRYYPDYYVLIKHPIALDTIRKRATGHTYTQLR
EFLEDVHLMFSNAKIYNEESSFVYQDAALLERMCIDKLKELLPTAQLEEMDQLLNFIQFD
EMFL
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtatgccaaccaaggaagaggttcagaaaattgtgcaacggtggcatcaatta
cgtgaccagtatggagatcaagttgtgaatgtcccagagtttgctcagttgaataaaacg
atcaataatatcaaaatgcaacaacaacaattacaacaacacatgcaacaacaacaacaa
caacaacaacaacaacaacaacagcaacagcgaaatatacagcgaccacaaatgccacaa
caaggccaaaaccaacagccatcacgttcatcatcacaagctcattctcaacaactgcag
caacggctacaacaccaagggtcacctgtaacactgaaccctgttccaccaacacctaac
cagcagttcactaatgttacaaatggtaacaatatgggggctcagatgggtaacatggct
gcctctccagctgctaatgtacaatcatcagtttcgggaaccccattttcacaagacgtg
aatttgctagctaattccaccaataataatcgctatccagcgcagtttactaacagaaca
atacaaaacggcaccaatactcagcagaatgtcaatcaaaatgcaaacagtaactggtcg
ttgaactccccagcacaactgtcccctaccaccgagtcagcattcacaaaccaacagttc
cagttgttgaagtcacaaatgcaagcaataaagtacttgaccaaatccccaaatcaaggg
ccaatgcctcaaaatttggtaagctttgtaacaaatcctgcgtcttcttaccccaccgac
ccttacttatcgacacctgcaaggaacaatagtgctataaatccaagtttcccttcaaga
gtagcctcaatatccaataacctgacaggtgctactgatgtccaagcacccactgagcct
gtggaaaagaaaaagggtaaaagaggccccaaaccgaagaataaagatcagcccaagaaa
atgtcaaagaagcagattaaagaggaagaacaaagacttgcggcggagaaacaacgagag
gagctagaacgttttcacaggattaagcaggaagagtatcaagtaccgcaacagaacccc
ttgggcccagcaccagcaccagcaccagcaccagcaccagcaccagcaccagcaccagca
ccagcaccagcaccagcaccagcaccagcaccagcacaacaacaagcacaacaacaagca
caacaacaagcacaagctgaacctaacttaacaccgcaagaaagtgaattctcatttgct
gacccatcgcctcctgttttgttaaataaaattgtcaacgagaagaacaaggattccaaa
attgttgttcctgttaccaagcctacggttgaggtcgatacatttgagagagtcgacatt
gttggggataagacccatgatgtacctctaagttttctttacactccacaaagtcgtatt
caaattccatctttgatacctcagggcctaagcttggaacaaattgcagctaaccgcgaa
ttgttcttgattttcagcatcgagaacgagaaggattcaatacgatcggagatacaatct
ttaggaaataatgatcccaaaagaaaggacaaattggtaacgaagttgaatgagttggaa
attattccaattcaaaaacaagctcggggtaagttgcttagtcaggtatggtatagtaaa
tctttgcttccaaattctcatcctaattttttggcaagattcaatacgttatcgatggaa
agtgtttccgttactattgatctctaccgtcaccaattggagtccttgatgagggaacaa
aacaaaaaacattcgcacgttttggaccaggtccttgactttagcacaagaaactctgcg
agagccaataagaaagctgataaggtgagcagatttatgcacaaaatagccggtcttcac
aacctgacggcaagagaagaacagaagaagctagaaaaaatggcaaaacaacgtttacag
gctttgaagctgaatgatgaggaagcttatttgaaacttttggaccacactaaggataca
agaattactcatttattaagacaaaccaaccagtttttggactccttggcacaagctgtt
caaactcaacagaaagaagccgaagcaaatcttgcaagcaccggtcgcttaccagaaggt
actgctgaggctgttgacgaagatgaaaaaagagagaagacggattattataacgttgcc
catagaatcaaagaggaagttacaaaacagccatcaatcctagtaggtggtaccttgaag
gaataccagttgaagggattgcaatggatggtatctttgttcaacaatcacttgaatggt
attttggccgatgagatgggtttgggaaagaccatccagacaatctcgcttttgacgtat
ttgatagaggtaaagaaaattcctggtccttttttggttattgttcctctttcaactgtg
acaaattggaatctcgaatttgaaaaatgggccccaacggtgaagaaaatcacttataaa
ggaactccaaatcaaagaaaagcaatgcagcatgaaatcaagacaggtaattttcagatt
cttctcaccacttttgaatacattatcaaagacaaggggctcttgggtagagtgaaatgg
gtgcatatgatcatcgatgaaggtcatcgtatgaaaaattccaactcaaaactttcagag
actttgactacaaactaccacagtgattatcgtttgattttgactggtacaccattacaa
aataacttgccagaattatgggcattattgaattttgtgttacctaaaattttcaactca
gtcaaatcttttgatgagtggttcaatactccatttgcaaacactggaggacaggacaaa
attgaattgagcgaagaagagacgttgttggtgatcagaaggttgcataaagttttgaga
ccatttttgttgagaagattgaaaaaggatgttgaaaaggacttgccaaataaagtagaa
aaggtagtcaagtgcaaaatgtccgcacttcaatccaaactttatcagcaaatgttgcgt
tacaatgccttatacgctggtgatccaaatgacgaaacagcagtcgttcctatcaaaaat
gccaataatcaaattatgcagttaaagaagatttgtaatcatcctttcgtttacgaggac
gtggaaaactttattaacccaacatcagagaataatgatctcatttggagagttgcagga
aagtttgaattattggataaagttttgccaaaattcaaagagactggtcataaagtgtta
atattcttccaaatgacacaggttatggatattatggaggactttcttagacttcgcggg
atgaagcatatgagacttgatggaggaaccaaagcggatgacagaacggagcttttgaaa
ttattcaacgcccctgactctgattacttttgttttcttttgtccaccagagctggtggt
ttagggttgaacttgcagactgcagatacggttatcatttttgatacggattggaaccca
catcaggatttgcaagcccaagatagagctcaccgtattggacagaaaaacgaagttaga
attttgcgattgattacagagaactctgtcgaggagatgatcttggaaagagctcacgca
aagttggaaattgatggtaaagtcattcaagcaggtaagttcgacaacaagtctacagct
gaagagcaagaggcaatgttgagggcattaattgaaaaggaagacgaacgtcgtactaaa
ggtctagatgaagaagaggaggatttggacgatgacgaattgaatgaaataattgcgaga
aacgaagcagaacttgtaaagtttaaagaacttgacgaagagaggtatgctgcaactagg
gatgctagttatcctacaagattactttctgaacaagaactccctcctatatataagaaa
gatccagaagaaatccttaagaaagatgacatttacacggaagattacggtcgtggcgcg
agagaaagaaagacaaccaaatatgatgataatttgaccgaagaacaatggttgaagcaa
attgaaggtgtcgtttcagatgatgatgatgacgatgacgagggtgatttcaatagtgat
agtgacatttaccaaagcggaaagagctctagaggaaagagtaaaggaaaacgaaagagg
ggatttggaaaagctcgcggagagaaagtgcatgccttagatggtgatgacgacagtacc
aacgaatatgatagttcgagtaagcgctcggctgatgagtccgataatttgatttcccaa
aagagacaaaagcttgacacacctgaacctgggtctgccccagggaacggaagaggtcgt
ggtaaattgagaggcaggggacgcggacgtggaagaggtcgtggatcgttgttatcacgt
tcgacaccatcaatagatccgttgtcgccagatgaaagagccatgcttcagaataatatt
gaaactcttctagggttgataatgaaccacaagaacgaggagggaagagctttgagtgac
ttatttttagttaagccatcgagaagatattatcctgattattatgtgttaataaaacac
cctattgcgctcgataccataaggaagagagcaactggacacacctatacccagttgaga
gaatttttggaagacgtccacttgatgttcagcaatgccaaaatttacaatgaagaaagc
tcgtttgtttatcaagatgctgctcttttggagagaatgtgcattgacaaactcaaggag
ttgcttccaacagcacaattagaggaaatggaccagctcttgaattttatacaatttgat
gagatgtttttatag
DBGET
integrated database retrieval system