Candida orthopsilosis: CORT_0A11390
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Entry
CORT_0A11390 CDS
T02488
Name
(RefSeq) Rna14 protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
cot
Candida orthopsilosis
Pathway
cot03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CORT_0A11390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cot03019
]
CORT_0A11390
Messenger RNA biogenesis [BR:
cot03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
CORT_0A11390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_19
AcMNPV_P18
ArlS_N
Motif
Other DBs
NCBI-GeneID:
14537331
NCBI-ProteinID:
XP_003866962
UniProt:
H8WYP2
LinkDB
All DBs
Position
1:complement(2511288..2513606)
Genome browser
AA seq
772 aa
AA seq
DB search
MSNPIFIKSNKPKKLSLDKIGQLEDDLETNPLDYNKWTKYLDYVVAKDNQEQVRKAFERY
LDIFKFDGVQWNKYIKYELSRGEKEKAEALFQKCFAITENVDLCRSYVDYVRSVTDMITG
GDKARGTIIQAFEFAVEKTGIDVQSDGLWQDYINFIKSWTPGANWEQQQKIDLIRKVYKK
ALVIPTENIETLWSQYTRWENELNQATAQKFVSEKSAEFMAARSWNTEWQNLTKKKLKRS
INPHGIDNETVEAQMKYWASWLLLEKKNSLQIKDEDLLQKRINYVYKEATYALPFVPQLW
FEYVKHLLNDNEESNLSNCISILNEGLKLNPKSLLLSFQLAELYEKDNSFDNAKVVYDRV
ISNLSQDHKTVSEMLDELYERIKPKMEDTNGDEEIEEEDESKTGGNDKSNGVSNGDSSGH
GLPTLPRRQNIPSLPQIPNNLAPVPNTDDSPTNASEQANSGLSGSELRTLMKLKKERDQL
VDEITLTYVKFMVASKRAEGMKEARDVFRQARKNESVGYQIYIENALLEHYADNKKTALK
VFGVGQKAFPTNGRFLLKFLDYLIMTNDVDKLRSTIQSSDTNISKEISQITEELTLDSLD
PILKEEKEQKLNLQKTYLKRLYKKYISFSANHLSLDITSSFAKKYEQLFPEDDPIDLFTD
RYKLEDINIIKRNELNQDDPDDYIAQARKRRKVSFNFDGIDSKSAVQSIQESSRREQEVI
QEEQSNDSSFVGPSIVALMSALPNASYFGLPSESVFNSDKLITLFSNLSNLA
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatcctattttcattaaaagcaacaagcccaaaaagttgtcattggataaaatt
ggacagttggaagatgatttagaaaccaaccctctagactacaacaaatggactaagtat
ttggattatgtggttgccaaagataaccaagaacaggtcaggaaagcttttgaaagatat
cttgatatattcaagtttgatggagttcaatggaacaaatacataaaatatgaactcagc
aggggagaaaaggagaaggcggaggcactttttcaaaaatgttttgccattacagagaat
gtcgacttgtgtcgtctgtatgttgactatgtgcgaagtgtgaccgatatgattaccggg
ggtgacaaagcaagaggaacaatcattcaagcttttgaatttgccgttgaaaagactggt
atagacgttcaaagtgatggattatggcaagactacatcaattttatcaaatcatggacc
cctggtgccaattgggaacaacaacaaaagatagatttgattcgtaaagtgtacaagaag
gctctagtcattcccaccgaaaacatcgaaaccttatggtcgcaatatacgaggtgggaa
aatgagctcaatcaagcaacagcacagaagtttgtgtccgaaaaatcggctgaatttatg
gccgctcgttcgtggaacacagaatggcagaaccttactaaaaagaaattgaaacggtct
ataaacccacatggtatagacaacgagacagtggaggcccaaatgaaatactgggcaagc
tggttactattggagaagaaaaattcattgcaaataaaggatgaagacttgcttcagaaa
cgaataaattatgtttacaaggaagctacctatgctctaccttttgtgccgcagctttgg
tttgaatatgtaaaacatttgttaaacgataacgaagaaagcaacttgagtaattgcatt
tctatactaaacgaaggtttaaaattaaatcctaagagcttgcttctctcctttcaacta
gccgaattgtacgaaaaggataattcttttgataacgccaaggtagtctatgaccgagtc
atttcaaatttgagtcaggatcataaaacagtttcagagatgttggatgagttgtatgag
cggatcaaaccaaagatggaggacacgaatggggatgaggaaatagaggaggaagatgaa
agcaaaacgggtggcaatgataaaagcaacggcgtttccaatggtgatctgagtgggcat
ggacttcccactcttcctcgtaggcagaacatacctagcttacctcaaatcccaaataat
ttggcacctgtacctaacacagatgattctcctacaaacgcttcggaacaagcaaattca
ggactatcggggctggagttgaggacattaatgaaattgaagaaagagcgcgatcaattg
gttgatgagattacacttacctatgtcaaatttatggttgcaagcaaaagagccgagggg
atgaaagaggctagagatgtatttcgccaggctagaaagaatgaatcagtcggataccag
atctatattgaaaacgctttgttggagcattatgctgataacaagaaaactgctttaaaa
gtatttggtgttggccaaaaagcatttcccacgaatggaaggtttttgttgaagttcttg
gattacttaattatgaccaatgatgttgacaagctaagaagtaccatacaaagctctgac
acaaacatttcaaaagagatatctcagattacagaggagctaaccctagatagcttggat
ccaatactcaaggaagaaaaggagcaaaagctcaacttgcaaaagacctatttgaagaga
ttgtacaaaaagtatatctcgttttcggcaaaccatttgtccttagatataacaagtagt
tttgccaaaaagtatgaacaattgtttccagaagatgacccgatcgatttatttactgac
aggtacaaacttgaagatatcaacattatcaagagaaatgaactcaatcaagacgatccg
gatgattacattgctcaagcaagaaaaaggcgtaaggtgtcgttcaattttgatggtatt
gattctaagtctgctgtacaaagcatacaggaatcaagccgcagagaacaggaggtaatt
caagaagagcaactgaatgattcatcattcgtaggtccctcaattgtggctttgatgtct
gccttgcccaatgcctcatattttggattaccctcggagagtgttttcaatagtgacaag
ttgattacattgttttccaatttatccaacttggcgtaa
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