Candida orthopsilosis: CORT_0A11980
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Entry
CORT_0A11980 CDS
T02488
Name
(RefSeq) Isw1 protein
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
cot
Candida orthopsilosis
Pathway
cot03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CORT_0A11980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cot03021
]
CORT_0A11980
03036 Chromosome and associated proteins [BR:
cot03036
]
CORT_0A11980
Transcription machinery [BR:
cot03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
CORT_0A11980
Chromosome and associated proteins [BR:
cot03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
CORT_0A11980
RSF complex
CORT_0A11980
WICH complex
CORT_0A11980
B-WICH complex
CORT_0A11980
NORC complex
CORT_0A11980
BRF complex
CORT_0A11980
NuRF complex (fruit fly)
CORT_0A11980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DEAD_2
AAA_14
Motif
Other DBs
NCBI-GeneID:
14537202
NCBI-ProteinID:
XP_003867021
UniProt:
H8WYV1
LinkDB
All DBs
Position
1:join(2639280..2639297,2639355..2642417)
Genome browser
AA seq
1026 aa
AA seq
DB search
MSSIEGTPSSELDEVIQNRSQLVFSDNASKYFTKSEKQQVDIEKTSNRFKYLLGLTGLFR
HFIEAKANKDPLFRKIVDDLHDSEAKHKSTSHDSMRRRKTEKEEDAELLKEQGSSKQPFE
FTESPGYVNGELRPYQIQGLNWLVSLYENNLSGILADEMGLGKTLQTISFLGYLRFMYKI
NGPHLVIAPKSTLDNWYREFQRWIPDINVLVLQGDKDERSDLIKNRVMTCDFDVIVASYE
IVIREKATFKKFDWEYIVIDEAHRIKNEESLLSQIIRMFHSKNRLLITGTPLQNNLRELW
ALLNFILPDVFADNDSFDEWFQKDETSEEDGEVISQLHKVLKPFLLRRIKADVEKSLLPK
KELNIYTKMTTMQKNLYQKILEKDIDAVNGANKKESKTRLLNIVMQLRKCCNHPYLFDGV
EPGPPYTTDEHLVYNAQKMIILDKLLKKFKAEGSRVLIFSQMSRMLDILEDYCYFREYPY
CRIDGQTEHADRINAIDEYNKPGSEKFVFLLTTRAGGLGINLTTADVVILFDSDWNPQAD
LQAMDRAHRIGQTKQVKVFRFITENAIEEKVLERAAQKLRLDQLVIQQGRNNTVGLDGQQ
SGKAASKNELLDMIQFGAADVFKKGQDQDQEQGGEQGQDLDIDELLKHSEEKTQELNEKY
AKLNLNALQNFTNDESVYEWNGENFKKKEPTAITNVGHAWINPGKRERKENYSIDMYYKD
VLHTGGGRSQQTVSKSGPRPPKQLNLYDHQFFPPKVFELYELEKNYYKKQIQYQVPLKAG
DASTLKQRELEQKLEQEEVAQSRPLTEEERQLKLDLMKQGFSNWNRKDFYHFISSCAKYG
RNSIPLIALEFQGDKTEEEVREYAKQFWVKYQEIEGFEKYINQIEQGEEKIIKLQTQKEA
LRRKLSQYQYPLLELKLKYPPSSNTKKVYSEEEDRFLLVQMYRFGIDSPNVYDLIKEAIR
DSPLFQFDFFLQSRNVTELARRCNTLLGCVLKEVNPEVQKQINGNGSSGTKRSKESTPVA
SKKSRK
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaatagaagggacaccatcactggagcttgatgaggtgattcaaaatagaagc
caactcgtgtttctggataatgccagtaaatatttcaccaaatcggaaaaacaacaagtt
gatattgaaaagactagtaataggttcaaatatctccttggattaactgggctattccgt
catttcattgaagctaaagctaataaagacccactttttcgtaaaattgttgatgatcta
catgatctggaagccaaacataaatcaacgagtcatgattcaatgaggagaaggaaaacg
gagaaggaagaagatgcggaattgttgaaagagcaaggttcaagtaagcaaccatttgag
tttactgagagtccgggctatgtcaatggtgaattgagaccttatcaaatccaaggtttg
aattggttagtttcattatatgagaataacttgtccggtatattggccgatgagatggga
ttgggtaagacattacagacgatttcatttttggggtatttaagattcatgtacaagatt
aatgggccacatttggtgattgctcccaaatcgactttggataattggtatagggagttt
caaagatggattcctgatattaatgtattggtgttgcaaggtgataaagacgagaggtcg
gatttgatcaagaatcgagtcatgacttgtgattttgatgttattgttgcttcatatgag
attgtaatcagagaaaaagcgacgtttaagaaatttgattgggaatatattgttattgat
gaagcacatagaattaagaatgaagaaagtttattgtcacagattatccgaatgtttcat
tcaaagaacagattgttgattactggtactccattgcaaaacaatctacgtgaattatgg
gcattattgaatttcatcttacccgatgtgtttgctgacaatgattcctttgatgaatgg
tttcaaaaagatgaaactagtgaagaagatggagaagtgatttcacaattgcataaagtc
ttgaaaccgttcttgttgagaagaattaaagctgatgttgagaaatcgttgttgccaaaa
aaggaattgaacatatacaccaaaatgaccaccatgcaaaagaatttgtaccaaaagatt
ttggaaaaggatattgatgccgtaaatggagccaacaagaaggaatccaagaccagatta
ctcaatattgtcatgcaattgagaaaatgttgtaatcatccatatttatttgatggagta
gaacctggacctccatatactactgatgagcatttagtgtataatgctcaaaagatgatc
attttggataaattgttgaaaaagtttaaagctgaaggttcaagagtattgatattctcg
caaatgagcagaatgttggatattttggaagactactgttatttccgagagtatccttat
tgtcgaatcgatggacaaacagagcatgctgatagaattaatgccattgatgaatataat
aaacctggcagtgaaaagtttgtgtttttattaactacaagagcaggtgggttaggtatc
aatttgactacggctgatgttgtcatcttgtttgattctgactggaacccacaagctgat
ttacaagcaatggatcgtgctcatcgaattggtcaaactaaacaagttaaagtgtttaga
tttatcactgaaaatgctattgaagaaaaagtgttggaaagagcagcacaaaagttgcgg
ttagatcaattggttattcaacaaggtcgtaataatactgttggcttagatggacagcaa
agtggtaaagctgcatccaagaatgagttattggatatgattcaatttggagctgctgat
gtgttcaaaaagggacaagatcaagaccaagaacaaggtggggaacagggccaagatttg
gatattgatgagttattgaaacattcagaagaaaagacccaagagttgaatgagaaatat
gctaaattgaatttaaatgcattgcaaaatttcactaatgatgagagtgtttatgaatgg
aatggtgaaaatttcaaaaagaaggaacccacagcgatcacaaatgttggacatgcatgg
atcaacccagggaagagagaacgtaaggagaactattcaattgatatgtactataaagat
gttttgcatactggtggtggtcgttcacaacaaacagtttccaaatcaggacccaggcca
ccaaagcaattgaatctatatgatcatcaatttttcccaccaaaagtgtttgaattatat
gaattggaaaagaattattacaagaaacaaattcaataccaagttcctttaaaagcaggt
gatgcatcaactttgaaacaaagggaattggaacagaaattagaacaagaagaagttgcc
caatcccgtcctttaactgaagaagaacgacaattaaaattggacttaatgaaacagggc
ttcagtaattggaatagaaaagatttttatcattttatatcaagttgtgccaagtatggg
cgtaattcaatcccattgattgcgttggagtttcagggtgataagaccgaagaagaagta
cgtgagtatgccaagcaattttgggtcaagtatcaagaaattgaagggtttgaaaaatat
atcaatcaaattgaacaaggggaggaaaagatcatcaaattacaaacccaaaaggaggca
ttgaggagaaaattatctcagtaccaatatccgcttttggaattgaaattgaagtatcct
ccatcttcaaataccaaaaaagtatatagtgaagaagaagatcgtttcttacttgttcaa
atgtaccgatttggtattgatctgcccaacgtttatgatttgattaaagaggcaatacgt
gattcaccattgtttcaatttgatttcttcttgcagagcaggaacgttactgaattggct
agaaggtgtaataccttgcttggatgtgttttgaaagaagttaatcctgaagtccagaaa
caaatcaatgggaatggatctagtggaacaaagagatctaaggaatctactcctgttgct
tcaaaaaagagtaggaagtaa
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