Candida orthopsilosis: CORT_0A13060
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Entry
CORT_0A13060 CDS
T02488
Name
(RefSeq) Rrn3 protein
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
cot
Candida orthopsilosis
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cot03021
]
CORT_0A13060
Transcription machinery [BR:
cot03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
CORT_0A13060
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
DUF1539
DUF7653
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
14536879
NCBI-ProteinID:
XP_003867127
UniProt:
H8WXL6
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Position
1:complement(join(2840319..2842160,2842234..2842347))
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AA seq
651 aa
AA seq
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MTLNNDTAASTTAMTNDDEFTEKMYSAYVKSAFASLEKDDSLQIDTLTDKINAPIDSSEA
ITIPHFSILLKGLINHTSKLDDRACNNLIFAILRYKWLVVSGIDQEVYTTFIDLYAHFLT
VLVSTLPKFLTEVLNKLVREFELFDSTTKSTRHHQILQKILRYIPTSINMIPQILQANFP
HHISSSTGEIINYVDNLMQVLTYCSELQFSIWQLIFECCIKLDVELQNELDDLDDDEIEE
LINGKDDDAELLEVTEEEEEGEAKEEEADSDDEEMGEVEWVDSATSTRSIKTLASKLDNI
MHLLLTKTSNSFTTEELNNGNGVTLFNTINSLFKSHILPTHFTKSIQFILFRITQYQQEL
ADSFLVLLIDVAFNPNEIVEKRLKAMQYISSYIARAKNLSRHQIVFIVSYLMGWLNKYII
EREQETFDIENKQKSGSQQQTGGMERFKLFYSAFQALLYIFCFRHEQLRKDPSQSTSTST
STTSSSSSEWECDIDKFFQRVIIVKFNPLKFCDETVVYIFAKLATKLNVCYCYSIIEHNK
RERMLQTNGSIVLPPSAVGNFKQKQEFLDLEAYFPFDPLVLPMCKKLVGQNYVEWSEVNP
DEDDDEDSASGSHMEDDDEDDEDDDDESDDSDDSDDSEDSDDDDDIDSDDD
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgacgctaaacaacgacacagctgcatcaaccaccgcgatgaccaatgatgacgagttt
acggaaaagatgtattcggcttatgttaaatctgcatttgcttccttggaaaaagatgat
tctttgcaaattgatacattaactgataagatcaatgctccaatagatagttcagaggct
ataacgataccccatttcagcatattattaaaaggcctcatcaaccatacatcaaaacta
gatgaccgtgcatgcaataacttaatctttgccattcttcgatataaatggttggtcgtg
tcaggaattgatcaagaagtttacaccacctttatagatttatatgcacattttctaact
gtattggttagtacattgcctaaattcctaactgaagttttgaacaaactagttcgtgaa
tttgaactatttgattcaactactaagtccactcgtcatcatcagattttgcaaaaaata
ttgaggtacattcctacaagtataaatatgattccacaaattttacaagccaattttcca
catcatatttcatcatccacgggggaaattataaactatgttgataatttaatgcaagtt
ttgacatactgttccgaattacaatttagtatatggcaattgatttttgagtgttgtatt
aagcttgatgttgaattgcagaatgaattggatgatttggatgatgatgagattgaagag
ttgattaatgggaaagacgatgatgcagaactactagaagttaccgaagaagaggaggaa
ggagaagcaaaagaggaggaggcagattctgatgacgaagagatgggggaagttgaatgg
gttgattcagcaacttcaacaagaagcatcaagacactagcatcaaaattggacaacatc
atgcatttattactcactaagacttccaattcattcactactgaagaattaaacaacgga
aatggagtaacattattcaacaccataaattcccttttcaaaagtcacatcttacctacc
catttcacaaaactgattcaattcattttgtttcgtattactcaataccaacaagaattg
gctgattcgtttttggtgctacttattgatgttgctttcaatccaaatgaaattgttgaa
aagagattaaaagcaatgcaatatatttcttcatatattgccagagccaagaatttatcg
cgtcatcaaattgttttcattgtgagttatcttatgggttggttaaacaagtatattatt
gaacgagaacaagaaacttttgatattgagaataaacaaaaatcaggttcacaacaacaa
actggaggtatggaaagattcaaacttttctattctgcatttcaagctttattatatata
ttctgcttcagacatgaacaattacgcaaggacccctcacaatcaacatccacatccaca
tcgacaacctcttcatcttcttcagaatgggagtgtgatatcgacaagttctttcaacgt
gtaatcattgtcaaatttaacccattgaaattttgtgacgagactgttgtttacattttc
gccaaattagcaactaaattaaatgtatgctattgttattccataattgaacacaacaaa
agagaaagaatgttgcaaactaatggttcgatagttttgcctccttcagcagtgggaaat
tttaaacaaaaacaagagtttttggacttggaagcctatttcccatttgatcctttggtt
ttacccatgtgtaaaaaattagtgggacaaaattatgttgaatggtcggaagtaaatcct
gatgaagatgatgatgaagatagtgcttctggaagtcacatggaagatgacgatgaagac
gatgaagatgatgatgatgagagtgatgatagtgatgatagtgatgatagcgaagacagc
gacgatgatgacgacattgatagtgatgatgactaa
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