Candida orthopsilosis: CORT_0A13180
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Entry
CORT_0A13180 CDS
T02488
Name
(RefSeq) Not3 protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cot
Candida orthopsilosis
Pathway
cot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CORT_0A13180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cot03019
]
CORT_0A13180
Messenger RNA biogenesis [BR:
cot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CORT_0A13180
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CORT_0A13180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
14536988
NCBI-ProteinID:
XP_003867139
UniProt:
H8WXM8
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Position
1:complement(join(2864456..2866568,2866628..2866650))
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AA seq
711 aa
AA seq
DB search
MANRKLQKDIDIIFKRIQEGLQDFNYHYERYESLTNTEDDSDNQREKEKLANDLKKEIKK
LQKFREQIKHWLSNDAVNTLGPVGTSYSAKLSENKSTIEDAMETYKLVEKQTKLKSFSNQ
SIMMAFADNENGEEEEDESEDEESSEEEDESLYDELSEEAVDLIRYFKDSISQLKEQTDK
YTHEYEKLASKKLRKNNLATIEAKKEKIQATVSNNKFHQKKLRKLIKQLKNGMVTDFNLI
FALKGDLEDYLDKHGDTDFTKDTELYDDIFNQISATDEDYSEIHEDTSTVATSVDSASVV
KNGHVEKKSKSPTPPKMSSRSSSEQPSYSQQHQQQNQIHHSQQLPKANQAHATHSNDNAE
HRHVSQTHSVTHSTAQASNHVPTTQQSPEMASPAIVRTLRPATTPSKPVGGLKWSAAAAV
GLPETPEKPALQDEVSELNSIKPESNIPFKPLELEDIDLEKYKTVISNSPLSKTERNLFS
NMDLVRAPPGIQDLVISFASKRNNEEFKILIDSTEFNQFTSPIYKPYLPKSVQPNYYSQF
TNFSFKHPTQLSKFQSHWNKIRAYYGFKSLTDEIKNLSPRDISESSALVTELTFVLFYGY
YYGLTPAENLIAESCLFEIGWKPYKSQFESNNRSPSPFGDASTDKKQGQGQTLYWFKRLK
LISNDPTDGQHATIEFGDYQVFDLNFWEIFVKYGFKFEYNLCQMEPSRTLF
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatagaaaactacaaaaggacatagatattattttcaaacgaatccaagagggt
ttacaagatttcaactaccattatgaaaggtatgaaagtctaacgaataccgaggatgat
tcagataatcaaagagagaaagagaaactagcaaatgatttaaaaaaggagataaagaaa
ctacagaagtttcgagaacagattaaacattggctactgaatgatgccgttaatacattg
ggaccagtggggacttcatacagtgccaagctttctgaaaacaaaagcacgattgaagat
gcaatggaaacttacaaactcgttgaaaaacagacaaaattgaagtcgttttcgaatcag
tcgatcatgatggcatttgccgataatgaaaatggagaggaggaagaagatgaaagtgaa
gatgaagaaagtagtgaagaagaagatgaaagtctatatgatgagttgtcagaggaagca
gtagacttgattagatatttcaaagactcgatatcgcaactcaaggaacaaacagataag
tatactcatgaatatgaaaagttggcgtcaaaaaagttgcgaaagaataaccttgccacg
attgaggccaaaaaagagaaaatacaagccacggtttcaaataacaaatttcatcagaaa
aagttgcgtaagttgatcaaacagctaaagaatggtatggttaccgatttcaaccttatt
ttcgcattgaagggtgatttggaagattatttggacaagcacggagatactgatttcact
aaagatactgagttgtacgatgacatattcaaccaaatctcagctacagatgaagattat
tcggaaattcatgaagacacttcaacagtagcaacatctgttgatagtgctagcgtagtg
aaaaatggtcatgttgagaaaaaatcaaaatcgccaacaccaccaaagatgtcgagccga
agctcaagtgaacaacctagttatagccaacaacaccagcagcagaaccagatccatcat
tcacagcagctacctaaagccaaccaggctcatgcgacacattccaatgataatgcagag
catcgacacgtttcacagacacattctgttacccattccactgcgcaagcttcaaatcat
gtaccaactactcaacaaagtccagaaatggcatcaccagctattgtcagaacattgaga
ccagcaacaacgccttcaaagccagttggtggactcaaatggtctgctgcagcagcagtt
ggcttacctgaaacaccagaaaaaccggcccttcaagatgaagtgtccgagttgaactca
ataaagcctgaatcaaacatacctttcaagccattggaacttgaggatattgatctagag
aaatacaagacagtgatttccaattcccccttatccaaaacagaacgtaatttgttttcc
aatatggatttggttcgtgcaccacctggaatccaagatttggtgatatcatttgcttca
aagcgaaataatgaagaattcaagattcttattgactcaacagaattcaatcaatttact
tcaccaatttacaaaccatatttacctaaaagtgttcaaccaaattattattcacaattt
acaaatttcagctttaaacatccaacccaattgagcaagtttcaatctcattggaataaa
atcagagcttattatggattcaagagcttgactgatgagatcaagaacttgtcgccgcga
gatatttctgagtcctcggcgttagtaacggagttgacgtttgttttgttctatggatat
tactatgggttaacaccagctgaaaacttgattgccgagagttgcttatttgaaattggt
tggaaaccatacaagagccaatttgaatctaacaatagaagcccctcaccatttggtgac
gcttctactgataaaaaacagggacaaggacaaactctatattggttcaagagattgaag
cttatatcgaatgacccaacagatggacaacacgcaacaattgaatttggtgattaccaa
gtatttgatttaaacttttgggaaatatttgtgaaatatggattcaagtttgagtataac
ttgtgtcaaatggaaccatcaaggacattattctag
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