Candida orthopsilosis: CORT_0B02140
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Entry
CORT_0B02140 CDS
T02488
Name
(RefSeq) Smx3 protein
KO
K11098
small nuclear ribonucleoprotein F
Organism
cot
Candida orthopsilosis
Pathway
cot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CORT_0B02140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cot03019
]
CORT_0B02140
03041 Spliceosome [BR:
cot03041
]
CORT_0B02140
03032 DNA replication proteins [BR:
cot03032
]
CORT_0B02140
Messenger RNA biogenesis [BR:
cot03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
CORT_0B02140
Spliceosome [BR:
cot03041
]
Complex A
U1 snRNP components
Sm proteins
CORT_0B02140
U2 snRNP components
CORT_0B02140
Complex B
U1 snRNP components
CORT_0B02140
U4/U6.U5 tri-snRNP components
CORT_0B02140
Complex C
U2 snRNP components
CORT_0B02140
DNA replication proteins [BR:
cot03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
CORT_0B02140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
14538191
NCBI-ProteinID:
XP_003867370
UniProt:
H8X0P3
LinkDB
All DBs
Position
2:complement(join(451264..451647,451703..451711))
Genome browser
AA seq
130 aa
AA seq
DB search
MSSFQPINPKPFMKSLIGKQVVVRLKWNKTEYRGQLISTDNYLNLQLDNTFEIIYDNEDK
PREEAIGSIFIRCNNVLFIREHKDQEAESKIPAKEESKKAKEADKTTNGDASGNGIEVTK
VELKEAVMEE
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgtctagttttcaaccaatcaatccaaaaccgttcatgaagtcgctaataggaaagcaa
gtggtggttagactaaaatggaacaagacagaatacagaggccaattgatatcgacagac
aattatctcaatttgcaattagataacacgtttgagataatttatgataacgaagataaa
cctcgcgaagaggccattggaagtatatttataaggtgcaataatgtgttgttcataaga
gaacataaagaccaagaagctgagagcaaaatacccgcgaaagaggaatccaaaaaggct
aaagaagcagacaagaccaccaatggtgatgcaagtggtaatggaatcgaggtcacaaag
gtagagttgaaagaagctgtaatggaggaataa
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