Candida orthopsilosis: CORT_0B02420
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Entry
CORT_0B02420 CDS
T02488
Name
(RefSeq) Rcf3 heteropentameric replication factor C subunit
KO
K10756
replication factor C subunit 3/5
Organism
cot
Candida orthopsilosis
Pathway
cot03030
DNA replication
cot03410
Base excision repair
cot03420
Nucleotide excision repair
cot03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CORT_0B02420
03410 Base excision repair
CORT_0B02420
03420 Nucleotide excision repair
CORT_0B02420
03430 Mismatch repair
CORT_0B02420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cot03032
]
CORT_0B02420
03036 Chromosome and associated proteins [BR:
cot03036
]
CORT_0B02420
03400 DNA repair and recombination proteins [BR:
cot03400
]
CORT_0B02420
DNA replication proteins [BR:
cot03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CORT_0B02420
DNA Replication Termination Factors
ELG1-RFC complex
CORT_0B02420
Chromosome and associated proteins [BR:
cot03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
CORT_0B02420
DNA repair and recombination proteins [BR:
cot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CORT_0B02420
Check point factors
HRAD17(Rad24)-RFC complex
CORT_0B02420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_assoc_2
RCF1-5-like_lid
RuvB_N
ResIII
AAA_11
AAA_16
AAA_14
AAA_22
AAA_30
AAA_24
DUF815
DEAD
AAA_5
AAA_7
SLFN-g3_helicase
bpMoxR
AAA_28
DNAX_ATPase_lid
Mg_chelatase
AAA_19
Viral_helicase1
RNA_helicase
TIP49
AAA_3
Motif
Other DBs
NCBI-GeneID:
14538314
NCBI-ProteinID:
XP_003867395
UniProt:
H8X0R8
LinkDB
All DBs
Position
2:join(501016..501047,501100..502069)
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AA seq
333 aa
AA seq
DB search
MTDKYRDNLPWVEKYRPENLTEVYGQQDIVNTIRRFVETGKLPHLLFYGPPGTGKTSTII
ALAREIYGPHYKNMVLELNASDDRGIDVVRNQIKSFASTRQIFTSSSSPQFKLIILDEAD
AMTSVAQNSLRRIIERYTKNCRFCILANYSHKLNPALISRCTRFRFHPIDEEAIRSRIDN
VIIKEKVNITPDALNALLRLSQGDMRRSLNVLQACKAACGDDETIDIEMIYNCVGAPHPQ
DIEAVLDSILKQDWTTAYLTLNKYKIDKGLALVDLITGFIEILNDYKVKPKTRIEYLKGL
CEVEYGISKGGNDKIQSSAIIGVIKQAMENEAK
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaagtacagggataacctaccatgggttgagaagtaccgtccagaaaacctt
actgaggtgtatggacaacaagatatcgtcaatactatacgaagatttgttgaaactggt
aaattaccccatttattattctacggacctccaggtaccggtaaaacatcaaccattatt
gcattagctcgcgaaatctatggtccacattacaaaaacatggttttggaattaaatgca
tctgatgatcgaggtattgatgttgtgcgtaatcaaatcaagagttttgcatcaacaaga
caaatttttaccagtagttcttcgccacagtttaagctcattatcttggatgaggccgat
gccatgactagtgttgctcagaactcattacgaagaatcattgaaaggtatactaaaaac
tgtcgattttgtatcttggctaattattcacacaagttaaacccagctttgatttcgaga
tgtactagattccgattccaccctattgatgaggaagctatacgtagtaggatcgataac
gttataatcaaagagaaagtcaatatcacccctgatgcattgaatgcattattacgtctt
tcacaaggtgatatgagacgaagtttgaatgttcttcaagcgtgtaaagcagcgtgtgga
gatgatgaaacgattgatattgaaatgatttataattgtgttggagctcctcatccacaa
gatatcgaggctgttttggattcaatattgaaacaagattggactactgcttatttgacg
ttgaataagtataaaattgataaagggttggctttggttgatttgattactgggtttatt
gagattttaaatgattataaagttaaaccaaagacgagaatagagtatttgaaagggttg
tgtgaggtcgaatatggaatatctaaaggtggtaatgacaagatccaaagtagtgcaatt
atcggagttattaaacaggccatggagaacgaagcgaagtag
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